RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 A0A0A6YYH2 397 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 RAB19A4D1S5 217 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 OR14I1A6ND48 311 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 A6NJ64 397 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 TMEM200CA6NKL6 621 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 SHISA8B8ZZ34 492 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 MYF5P13349 255 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 ADCYAP1P18509 176 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 ZBTB25P24278 435 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 CD27P26842 260 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 CASRP41180 1078 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 AKR1C2P52895 323 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 FBXW4P57775 412 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 AKR1C1Q04828 323 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 TDGQ13569 410 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 ZNF260Q3ZCT1 412 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 RNASE10Q5GAN6 216 aaKnown RBP14.7□□□□□ -0.06
LIG1-206ENST00000594067 OR52N4Q8NGI2 321 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 NUDCD2Q8WVJ2 157 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 AQP3Q92482 292 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 EMC6Q9BV81 110 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 ATXN7L1Q9ULK2 861 aaPredicted RBP14.7□□□□□ -0.06
LIG1-206ENST00000594067 PLEKHA6Q9Y2H5 1048 aa14.7□□□□□ -0.06
LIG1-206ENST00000594067 A6NIZ1 184 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 RAB27BO00194 218 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 ZNF354AO60765 605 aaPredicted RBP14.69□□□□□ -0.06
LIG1-206ENST00000594067 RAP1BP61224 184 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 RAP1AP62834 184 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 INPP5JQ15735 1006 aaPredicted RBP14.69□□□□□ -0.06
LIG1-206ENST00000594067 GUCA2BQ16661 112 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 DNM1P34Q6PK57 102 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 PAQR4Q8N4S7 273 aaPredicted RBP14.69□□□□□ -0.06
LIG1-206ENST00000594067 KCNK17Q96T54 332 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 FOXQ1Q9C009 403 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 RAB33BQ9H082 229 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 PTGES2Q9H7Z7 377 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 SUSD2Q9UGT4 822 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 ZNF107Q9UII5 783 aaPredicted RBP14.69□□□□□ -0.06
LIG1-206ENST00000594067 METTL21EPA6NDL7 271 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 FAM25EA8MYX2 175 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 LMO7DNF2Z398 122 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 UNC119Q13432 240 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 PPP1R1AQ13522 171 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 SYT13Q7L8C5 426 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 RTN4RL2Q86UN3 420 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 SLC25A42Q86VD7 318 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 NKAIN3Q8N8D7 197 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 TMEM234Q8WY98 164 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 MRGPRFQ96AM1 343 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 C5orf34Q96MH7 638 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 CST11Q9H112 138 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 RAB22AQ9UL26 194 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 IGHV1OR21-1A0A087WYE8 117 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 F5H0A9 414 aaPredicted RBP14.69□□□□□ -0.06
LIG1-206ENST00000594067 NUDT21O43809 227 aaKnown RBP14.69□□□□□ -0.06
LIG1-206ENST00000594067 HOXA1P49639 335 aaPredicted RBP14.69□□□□□ -0.06
LIG1-206ENST00000594067 RNF4P78317 190 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 TLE3Q04726 772 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 CCDC157Q569K6 752 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 UNQ6126/PRO20091Q6UXV3 157 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 ZNF813Q6ZN06 617 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 H1FNTQ75WM6 255 aaPredicted RBP14.69□□□□□ -0.06
LIG1-206ENST00000594067 RHOUQ7L0Q8 258 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 LYG2Q86SG7 212 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 SVBPQ8N300 66 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 WNT2BQ93097 391 aa14.69□□□□□ -0.06
LIG1-206ENST00000594067 ADAT3Q96EY9 351 aaPredicted RBP14.69□□□□□ -0.06
LIG1-206ENST00000594067 ADAT1Q9BUB4 502 aaKnown RBP14.69□□□□□ -0.06
LIG1-206ENST00000594067 ASXL3Q9C0F0 2248 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 OR6C76A6NM76 312 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 H3BML4 177 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 AVPR2P30518 371 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 DAP3P51398 398 aaKnown RBP14.68□□□□□ -0.06
LIG1-206ENST00000594067 HSF1Q00613 529 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 MEF2DQ14814 521 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 PCK2Q16822 640 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 OGFOD3Q6PK18 319 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 C11orf40Q8WZ69 217 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 PTX4Q96A99 478 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 FOXRED1Q96CU9 486 aaPredicted RBP14.68□□□□□ -0.06
LIG1-206ENST00000594067 PRRT1Q99946 306 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 NUDT22Q9BRQ3 303 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 ASF1BQ9NVP2 202 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 FAM206AQ9NX38 181 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 MLXQ9UH92 298 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 CPED1A4D0V7 1026 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 METTL12A8MUP2 240 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 FGF16O43320 207 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 KCNAB3O43448 404 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 IL2RAP01589 272 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 TTRP02766 147 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 DCNP07585 359 aaKnown RBP14.68□□□□□ -0.06
LIG1-206ENST00000594067 GNB3P16520 340 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 RAB6AP20340 208 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 RPL35P42766 123 aaKnown RBP14.68□□□□□ -0.06
LIG1-206ENST00000594067 B2MP61769 119 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 C5orf46Q6UWT4 87 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 OR5AP2Q8NGF4 316 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 CASTOR1Q8WTX7 329 aa14.68□□□□□ -0.06
LIG1-206ENST00000594067 MITD1Q8WV92 249 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 387.9 ms