RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 MFGE8Q08431 387 aaPredicted RBP11.75□□□□□ -0.53
VMP1-217ENST00000593168 DGUOKQ16854 277 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 ZMAT1Q5H9K5 638 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 C9orf135Q5VTT2 229 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 TMEM244Q5VVB8 128 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 ZNF704Q6ZNC4 412 aaPredicted RBP11.75□□□□□ -0.53
VMP1-217ENST00000593168 ELMOD2Q8IZ81 293 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 GABRG1Q8N1C3 465 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 OR1F12Q8NHA8 337 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 THRSPQ92748 146 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 SPTSSAQ969W0 71 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 DACH2Q96NX9 599 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 SFXN3Q9BWM7 321 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 ZNF224Q9NZL3 707 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 ATPIF1Q9UII2 106 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 ITGB1BP2Q9UKP3 347 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 SLC22A13Q9Y226 551 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 KLF2Q9Y5W3 355 aaPredicted RBP11.75□□□□□ -0.53
VMP1-217ENST00000593168 MED13LQ71F56 2210 aa11.75□□□□□ -0.53
VMP1-217ENST00000593168 A0A096LPE4 126 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 TRBV5-5A0A0J9YX44 114 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 A0A1W2PPZ6 126 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 ZNF879B4DU55 563 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 DOK2O60496 412 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 ARL6IP5O75915 188 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 PATE4P0C8F1 98 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 COX5BP10606 129 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 ACHEP22303 614 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 CRYGSP22914 178 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 CX3CR1P49238 355 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 PRKXP51817 358 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 INSL4Q14641 139 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 P2RY6Q15077 328 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 RSPO1Q2MKA7 263 aaPredicted RBP11.74□□□□□ -0.53
VMP1-217ENST00000593168 KRTAP27-1Q3LI81 207 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 Q499Y3 187 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 BCL2L15Q5TBC7 163 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 ZNF774Q6NX45 483 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 BEND4Q6ZU67 534 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 RPRMLQ8N4K4 120 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 ZNF283Q8N7M2 679 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 NAXEQ8NCW5 288 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 C1orf162Q8NEQ5 155 aaPredicted RBP11.74□□□□□ -0.53
VMP1-217ENST00000593168 FGFBP3Q8TAT2 258 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 GPR148Q8TDV2 347 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 NANOS1Q8WY41 292 aaKnown RBP11.74□□□□□ -0.53
VMP1-217ENST00000593168 RGP1Q92546 391 aaPredicted RBP11.74□□□□□ -0.53
VMP1-217ENST00000593168 PPP1R14AQ96A00 147 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 CCDC120Q96HB5 630 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 PBOV1Q9GZY1 135 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 WNT5BQ9H1J7 359 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 RNF121Q9H920 327 aa11.74□□□□□ -0.53
VMP1-217ENST00000593168 NUFIP1Q9UHK0 495 aaKnown RBP11.74□□□□□ -0.53
VMP1-217ENST00000593168 INTS1Q8N201 2190 aaKnown RBP11.74□□□□□ -0.53
VMP1-217ENST00000593168 UBL3O95164 117 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 CDRT1O95170 752 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 RAF1P04049 648 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 UCHL1P09936 223 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 UBCP0CG48 685 aaKnown RBP11.73□□□□□ -0.53
VMP1-217ENST00000593168 MAPK3P27361 379 aaPredicted RBP11.73□□□□□ -0.53
VMP1-217ENST00000593168 SDC2P34741 201 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 OPRM1P35372 400 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 RPS19P39019 145 aaKnown RBP11.73□□□□□ -0.53
VMP1-217ENST00000593168 MTNR1BP49286 362 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 TPTEP56180 551 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 ZNF121P58317 390 aaPredicted RBP11.73□□□□□ -0.53
VMP1-217ENST00000593168 GALK2Q01415 458 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 GABRA6Q16445 453 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 TBRG1Q3YBR2 411 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 PABPC1L2AQ5JQF8 200 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 TMEM53Q6P2H8 277 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 DRAM2Q6UX65 266 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 PRSS45Q7RTY3 260 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 MRGPRGQ86SM5 289 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 RDH10Q8IZV5 341 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 ZNF433Q8N7K0 673 aaPredicted RBP11.73□□□□□ -0.53
VMP1-217ENST00000593168 ZNF610Q8N9Z0 462 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 OR13C5Q8NGS8 318 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 AKR7LQ8NHP1 331 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 TSC22D3Q99576 134 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 SLC17A5Q9NRA2 495 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 CCDC59Q9P031 241 aaKnown RBP11.73□□□□□ -0.53
VMP1-217ENST00000593168 GTF2A1LQ9UNN4 478 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 A3GALT2U3KPV4 340 aa11.73□□□□□ -0.53
VMP1-217ENST00000593168 PKDREJQ9NTG1 2253 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 TRAV1-2A0A0B4J238 106 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 CIB4A0PJX0 185 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 E9PLN8 166 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 F5H5K5 113 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 M0R135 149 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 DVL2O14641 736 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 HLA-HP01893 362 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 TTRP02766 147 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 COX6B1P14854 86 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 HTR5AP47898 357 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 RAB1AP62820 205 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 PMPCAQ10713 525 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 LSAMPQ13449 338 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 TMEM211Q6ICI0 200 aa11.72□□□□□ -0.53
VMP1-217ENST00000593168 C3P1Q6ZMU1 363 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms