RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 ARL6IP5O75915 188 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 ISG15P05161 165 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 MAPK3P27361 379 aaPredicted RBP19.4■□□□□ 0.7
ATG4D-209ENST00000588857 CALRP27797 417 aaKnown RBP19.4■□□□□ 0.7
ATG4D-209ENST00000588857 CA7P43166 264 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 Q499Y3 187 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 CPEB3Q8NE35 698 aaKnown RBP19.4■□□□□ 0.7
ATG4D-209ENST00000588857 DYNC2LI1Q8TCX1 351 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 PHYHIPQ92561 330 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 THRSPQ92748 146 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 PGAM5Q96HS1 289 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 BOD1Q96IK1 185 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 SLC24A3Q9HC58 644 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 B3GNT2Q9NY97 397 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 OSGIN2Q9Y236 505 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 IQCMA0A1B0GVH7 501 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 DVL2O14641 736 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 TTRP02766 147 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 COX5BP10606 129 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 TSC22D1Q15714 1073 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 SFRP5Q5T4F7 317 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 ZNF474Q6S9Z5 364 aaPredicted RBP19.4■□□□□ 0.7
ATG4D-209ENST00000588857 UNQ9370/PRO34162Q6UXP9 181 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 TSEN15Q8WW01 171 aaKnown RBP19.4■□□□□ 0.7
ATG4D-209ENST00000588857 DMRTA2Q96SC8 542 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 SP140LQ9H930 580 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 SLC17A5Q9NRA2 495 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 HHLA2Q9UM44 414 aa19.4■□□□□ 0.7
ATG4D-209ENST00000588857 TRBV5-5A0A0J9YX44 114 aa19.39■□□□□ 0.69
ATG4D-209ENST00000588857 EEF1E1-BLOC1S5C9J1V9 151 aa19.39■□□□□ 0.69
ATG4D-209ENST00000588857 H3BSH0 61 aa19.39■□□□□ 0.69
ATG4D-209ENST00000588857 P2RY10O00398 339 aa19.39■□□□□ 0.69
ATG4D-209ENST00000588857 EEF1E1O43324 174 aaKnown RBP19.39■□□□□ 0.69
ATG4D-209ENST00000588857 CDRT1O95170 752 aa19.39■□□□□ 0.69
ATG4D-209ENST00000588857 ACSM4P0C7M7 580 aa19.39■□□□□ 0.69
ATG4D-209ENST00000588857 ACHEP22303 614 aa19.39■□□□□ 0.69
ATG4D-209ENST00000588857 MYL9P24844 172 aa19.39■□□□□ 0.69
ATG4D-209ENST00000588857 APEX1P27695 318 aaKnown RBP19.39■□□□□ 0.69
ATG4D-209ENST00000588857 KRTAP27-1Q3LI81 207 aa19.39■□□□□ 0.69
ATG4D-209ENST00000588857 FAM27D1Q5T7N8 215 aa19.39■□□□□ 0.69
ATG4D-209ENST00000588857 NCCRP1Q6ZVX7 275 aaPredicted RBP19.39■□□□□ 0.69
ATG4D-209ENST00000588857 BHLHA15Q7RTS1 189 aaPredicted RBP19.39■□□□□ 0.69
ATG4D-209ENST00000588857 NAA40Q86UY6 237 aa19.39■□□□□ 0.69
ATG4D-209ENST00000588857 C17orf78Q8N4C9 275 aa19.39■□□□□ 0.69
ATG4D-209ENST00000588857 OR8B12Q8NGG6 310 aa19.39■□□□□ 0.69
ATG4D-209ENST00000588857 OR10AC1Q8NH08 325 aa19.39■□□□□ 0.69
ATG4D-209ENST00000588857 NOX3Q9HBY0 568 aa19.39■□□□□ 0.69
ATG4D-209ENST00000588857 MYO7BQ6PIF6 2116 aa19.38■□□□□ 0.69
ATG4D-209ENST00000588857 PCNX1Q96RV3 2341 aa19.38■□□□□ 0.69
ATG4D-209ENST00000588857 ARPC4-TTLL3A0A0A6YYG9 625 aa19.38■□□□□ 0.69
ATG4D-209ENST00000588857 LOC107986453A0A1B0GWG9 222 aa19.38■□□□□ 0.69
ATG4D-209ENST00000588857 A0A1W2PPK0 400 aa19.38■□□□□ 0.69
ATG4D-209ENST00000588857 IL1AP01583 271 aa19.38■□□□□ 0.69
ATG4D-209ENST00000588857 IL32P24001 234 aa19.38■□□□□ 0.69
ATG4D-209ENST00000588857 STOMP27105 288 aa19.38■□□□□ 0.69
ATG4D-209ENST00000588857 SDC2P34741 201 aa19.38■□□□□ 0.69
ATG4D-209ENST00000588857 RPS19P39019 145 aaKnown RBP19.38■□□□□ 0.69
ATG4D-209ENST00000588857 SOX2P48431 317 aa19.38■□□□□ 0.69
ATG4D-209ENST00000588857 DGUOKQ16854 277 aa19.38■□□□□ 0.69
ATG4D-209ENST00000588857 PRSS45Q7RTY3 260 aa19.38■□□□□ 0.69
ATG4D-209ENST00000588857 MRGPRGQ86SM5 289 aa19.38■□□□□ 0.69
ATG4D-209ENST00000588857 MDP1Q86V88 176 aa19.38■□□□□ 0.69
ATG4D-209ENST00000588857 COMMD2Q86X83 199 aa19.38■□□□□ 0.69
ATG4D-209ENST00000588857 OR51A4Q8NGJ6 313 aa19.38■□□□□ 0.69
ATG4D-209ENST00000588857 DERL3Q96Q80 235 aa19.38■□□□□ 0.69
ATG4D-209ENST00000588857 MED18Q9BUE0 208 aa19.38■□□□□ 0.69
ATG4D-209ENST00000588857 PPIL3Q9H2H8 161 aaKnown RBP19.38■□□□□ 0.69
ATG4D-209ENST00000588857 SNTG1Q9NSN8 517 aa19.38■□□□□ 0.69
ATG4D-209ENST00000588857 RELNP78509 3460 aa19.37■□□□□ 0.69
ATG4D-209ENST00000588857 A8MXE2 369 aa19.37■□□□□ 0.69
ATG4D-209ENST00000588857 CASKO14936 926 aa19.37■□□□□ 0.69
ATG4D-209ENST00000588857 TBX1O43435 398 aa19.37■□□□□ 0.69
ATG4D-209ENST00000588857 UCHL1P09936 223 aa19.37■□□□□ 0.69
ATG4D-209ENST00000588857 SOX6P35712 828 aa19.37■□□□□ 0.69
ATG4D-209ENST00000588857 MAGEB1P43366 347 aa19.37■□□□□ 0.69
ATG4D-209ENST00000588857 MXD1Q05195 221 aa19.37■□□□□ 0.69
ATG4D-209ENST00000588857 HSD17B12Q53GQ0 312 aa19.37■□□□□ 0.69
ATG4D-209ENST00000588857 GALNT11Q8NCW6 608 aa19.37■□□□□ 0.69
ATG4D-209ENST00000588857 OR52H1Q8NGJ2 320 aa19.37■□□□□ 0.69
ATG4D-209ENST00000588857 OR51E1Q8TCB6 317 aa19.37■□□□□ 0.69
ATG4D-209ENST00000588857 OR10A2Q9H208 303 aa19.37■□□□□ 0.69
ATG4D-209ENST00000588857 TPK1Q9H3S4 243 aa19.37■□□□□ 0.69
ATG4D-209ENST00000588857 NOX4Q9NPH5 578 aa19.37■□□□□ 0.69
ATG4D-209ENST00000588857 DHDHQ9UQ10 334 aa19.37■□□□□ 0.69
ATG4D-209ENST00000588857 TENM4Q6N022 2769 aa19.37■□□□□ 0.69
ATG4D-209ENST00000588857 MYO18BQ8IUG5 2567 aa19.36■□□□□ 0.69
ATG4D-209ENST00000588857 A0A1B0GVI7 797 aa19.36■□□□□ 0.69
ATG4D-209ENST00000588857 CCL21O00585 134 aa19.36■□□□□ 0.69
ATG4D-209ENST00000588857 LCATP04180 440 aa19.36■□□□□ 0.69
ATG4D-209ENST00000588857 MTNR1BP49286 362 aa19.36■□□□□ 0.69
ATG4D-209ENST00000588857 OR13C3Q8NGS6 347 aa19.36■□□□□ 0.69
ATG4D-209ENST00000588857 TMEM106AQ96A25 262 aa19.36■□□□□ 0.69
ATG4D-209ENST00000588857 OBP2BQ9NPH6 170 aa19.36■□□□□ 0.69
ATG4D-209ENST00000588857 LOC100509620A0A075B734 347 aa19.36■□□□□ 0.69
ATG4D-209ENST00000588857 A0A1W2PR80 420 aa19.36■□□□□ 0.69
ATG4D-209ENST00000588857 C5orf49A4QMS7 147 aa19.36■□□□□ 0.69
ATG4D-209ENST00000588857 SYT7O43581 403 aa19.36■□□□□ 0.69
ATG4D-209ENST00000588857 RAF1P04049 648 aa19.36■□□□□ 0.69
ATG4D-209ENST00000588857 SERPINA5P05154 406 aa19.36■□□□□ 0.69
ATG4D-209ENST00000588857 CD2P06729 351 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms