RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 CNIH3Q8TBE1 160 aa7.8□□□□□ -1.16
CIRBP-218ENST00000588344 SLC25A40Q8TBP6 338 aa7.8□□□□□ -1.16
CIRBP-218ENST00000588344 KLF14Q8TD94 323 aaPredicted RBP7.8□□□□□ -1.16
CIRBP-218ENST00000588344 SLC7A6Q92536 515 aa7.8□□□□□ -1.16
CIRBP-218ENST00000588344 NEUROG1Q92886 237 aa7.8□□□□□ -1.16
CIRBP-218ENST00000588344 MYDGFQ969H8 173 aa7.8□□□□□ -1.16
CIRBP-218ENST00000588344 MARS2Q96GW9 593 aaKnown RBP7.8□□□□□ -1.16
CIRBP-218ENST00000588344 TMEM80Q96HE8 168 aa7.8□□□□□ -1.16
CIRBP-218ENST00000588344 DOK1Q99704 481 aa7.8□□□□□ -1.16
CIRBP-218ENST00000588344 TRAF4Q9BUZ4 470 aaPredicted RBP7.8□□□□□ -1.16
CIRBP-218ENST00000588344 OR10A2Q9H208 303 aa7.8□□□□□ -1.16
CIRBP-218ENST00000588344 MOB1AQ9H8S9 216 aa7.8□□□□□ -1.16
CIRBP-218ENST00000588344 BEX4Q9NWD9 120 aaPredicted RBP7.8□□□□□ -1.16
CIRBP-218ENST00000588344 IKZF2Q9UKS7 526 aa7.8□□□□□ -1.16
CIRBP-218ENST00000588344 LAMP3Q9UQV4 416 aa7.8□□□□□ -1.16
CIRBP-218ENST00000588344 STARD10Q9Y365 291 aa7.8□□□□□ -1.16
CIRBP-218ENST00000588344 NOP16Q9Y3C1 178 aaKnown RBP7.8□□□□□ -1.16
CIRBP-218ENST00000588344 TPRKBQ9Y3C4 175 aa7.8□□□□□ -1.16
CIRBP-218ENST00000588344 LRP12Q9Y561 859 aa7.8□□□□□ -1.16
CIRBP-218ENST00000588344 DCHS2Q6V1P9 2916 aa7.8□□□□□ -1.16
CIRBP-218ENST00000588344 HECTD1Q9ULT8 2610 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 IGLV3-9A0A075B6K5 115 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 PLSCR5A0PG75 271 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 OVOL3O00110 214 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 GPRIN2O60269 458 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 NGFP01138 241 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 CD8AP01732 235 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 ANXA2P07355 339 aaKnown RBP7.79□□□□□ -1.16
CIRBP-218ENST00000588344 PSKH1P11801 424 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 ATP6V1B1P15313 513 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 MYL12AP19105 171 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 CD53P19397 219 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 KITLGP21583 273 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 PPOXP50336 477 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 PRKXP51817 358 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 ZNF121P58317 390 aaPredicted RBP7.79□□□□□ -1.16
CIRBP-218ENST00000588344 KRTAP10-9P60411 292 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 PSMA6P60900 246 aaKnown RBP7.79□□□□□ -1.16
CIRBP-218ENST00000588344 SMN1Q16637 294 aaKnown RBP7.79□□□□□ -1.16
CIRBP-218ENST00000588344 CDONQ4KMG0 1287 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 RBM48Q5RL73 367 aaKnown RBP7.79□□□□□ -1.16
CIRBP-218ENST00000588344 RNLSQ5VYX0 342 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 LRRN1Q6UXK5 716 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 SPATC1Q76KD6 591 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 LRRC75A-AS1Q8N1F1 130 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 SYS1Q8N2H4 156 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 STX19Q8N4C7 294 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 YIPF7Q8N8F6 280 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 CCDC54Q8NEL0 328 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 BPIFB6Q8NFQ5 453 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 OR52I1Q8NGK6 324 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 SPSB4Q96A44 273 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 CMBLQ96DG6 245 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 PGAM5Q96HS1 289 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 DIRC2Q96SL1 478 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 AMELYQ99218 206 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 YTHDF1Q9BYJ9 559 aaKnown RBP7.79□□□□□ -1.16
CIRBP-218ENST00000588344 OR2J1Q9GZK6 312 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 SLC22A4Q9H015 551 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 BARX1Q9HBU1 254 aaPredicted RBP7.79□□□□□ -1.16
CIRBP-218ENST00000588344 AMBNQ9NP70 447 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 AASSQ9UDR5 926 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 PSORS1C1Q9UIG5 152 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 BLOC1S6Q9UL45 172 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 DIMT1Q9UNQ2 313 aaKnown RBP7.79□□□□□ -1.16
CIRBP-218ENST00000588344 COPS3Q9UNS2 423 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 EXOSC1Q9Y3B2 195 aaKnown RBP7.79□□□□□ -1.16
CIRBP-218ENST00000588344 SNX5Q9Y5X3 404 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 PTPN13Q12923 2485 aa7.79□□□□□ -1.16
CIRBP-218ENST00000588344 A0A0U1RQV5 110 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 A0A1W2PPW3 197 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 TMEM129A0AVI4 362 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 H7C417 338 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 M0R233 179 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 FAM20BO75063 409 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 APOL3O95236 402 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 SOD3P08294 240 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 ZNF85Q03923 595 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 ST3GAL4Q11206 333 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 PSG7Q13046 419 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 TIGD6Q17RP2 521 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 NKPD1Q17RQ9 610 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 MST1LQ2TV78 715 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 PCGF3Q3KNV8 242 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 ZNF684Q5T5D7 378 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 LIPNQ5VXI9 398 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 C11orf71Q6IPW1 123 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 RFPL4BQ6ZWI9 263 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 PGAP1Q75T13 922 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 PRSS45Q7RTY3 260 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 MRPL21Q7Z2W9 205 aaKnown RBP7.78□□□□□ -1.16
CIRBP-218ENST00000588344 CDH24Q86UP0 819 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 NAA40Q86UY6 237 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 FTMTQ8N4E7 242 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 ZNF540Q8NDQ6 660 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 NEU4Q8WWR8 484 aaPredicted RBP7.78□□□□□ -1.16
CIRBP-218ENST00000588344 IGFBPL1Q8WX77 278 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 GGHQ92820 318 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 TBX5Q99593 518 aa7.78□□□□□ -1.16
CIRBP-218ENST00000588344 ALG8Q9BVK2 526 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms