RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 SH3GL3Q99963 347 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 OR51E2Q9H255 320 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 MMP27Q9H306 513 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 KLHDC2Q9Y2U9 406 aa11.04□□□□□ -0.64
VMP1-202ENST00000585847 TMEM269A0A1B0GVZ9 245 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 OR4C45A6NMZ5 311 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 DHRS7CA6NNS2 312 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 PRSS44E7EML9 344 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 GABRPO00591 440 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 SGCEO43556 437 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 GPX5O75715 221 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 CLPXO76031 633 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 ZFPL1O95159 310 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 UCHL1P09936 223 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 CD79BP40259 229 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 RORCP51449 518 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 CAPZA1P52907 286 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 NCS1P62166 190 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 RPS25P62851 125 aaKnown RBP11.03□□□□□ -0.64
VMP1-202ENST00000585847 DBPQ10586 325 aaPredicted RBP11.03□□□□□ -0.64
VMP1-202ENST00000585847 FAPQ12884 760 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 TSC22D1Q15714 1073 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 ZMAT1Q5H9K5 638 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 TMEM53Q6P2H8 277 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 LRRN1Q6UXK5 716 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 STAC2Q6ZMT1 411 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 BEND4Q6ZU67 534 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 C22orf34Q6ZV56 151 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 CATSPERDQ86XM0 798 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 RNASE6Q93091 150 aaKnown RBP11.03□□□□□ -0.64
VMP1-202ENST00000585847 MAP6Q96JE9 813 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 TMED9Q9BVK6 235 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 NAA50Q9GZZ1 169 aaKnown RBP11.03□□□□□ -0.64
VMP1-202ENST00000585847 OPA3Q9H6K4 179 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 EMC7Q9NPA0 242 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 CRNNQ9UBG3 495 aaPredicted RBP11.03□□□□□ -0.64
VMP1-202ENST00000585847 CKLFQ9UBR5 152 aa11.03□□□□□ -0.64
VMP1-202ENST00000585847 A0A075B6Q4 140 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 TRBV5-5A0A0J9YX44 114 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 A0A0U1RQV5 110 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 IQCMA0A1B0GVH7 501 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 B4GALT1P15291 398 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 IGFBP2P18065 325 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 HOXC12P31275 282 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 HCCSP53701 268 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 TPTEP56180 551 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 RIPPLY3P57055 190 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 VBP1P61758 197 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 FABP5Q01469 135 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 PLP2Q04941 152 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 SLC3A1Q07837 685 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 SPCS2Q15005 226 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 SP5Q6BEB4 398 aaPredicted RBP11.02□□□□□ -0.65
VMP1-202ENST00000585847 CXorf67Q86X51 503 aaPredicted RBP11.02□□□□□ -0.65
VMP1-202ENST00000585847 ELMOD2Q8IZ81 293 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 UBE2J2Q8N2K1 259 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 ZNF433Q8N7K0 673 aaPredicted RBP11.02□□□□□ -0.65
VMP1-202ENST00000585847 ACOT12Q8WYK0 555 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 RPL3LQ92901 407 aaKnown RBP11.02□□□□□ -0.65
VMP1-202ENST00000585847 SLC25A46Q96AG3 418 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 CENPOQ9BU64 300 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 KCNJ16Q9NPI9 418 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 PNRC2Q9NPJ4 139 aaKnown RBP11.02□□□□□ -0.65
VMP1-202ENST00000585847 SNTG1Q9NSN8 517 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 CENPMQ9NSP4 180 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 PLEK2Q9NYT0 353 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 HHLA2Q9UM44 414 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 OTOGQ6ZRI0 2925 aa11.02□□□□□ -0.65
VMP1-202ENST00000585847 E9PI62 339 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 SRSF10O75494 262 aaKnown RBP11.01□□□□□ -0.65
VMP1-202ENST00000585847 LYZL6O75951 148 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 MPZL1O95297 269 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 SERPINA5P05154 406 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 ZNF182P17025 639 aaPredicted RBP11.01□□□□□ -0.65
VMP1-202ENST00000585847 FSTP19883 344 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 PSMB1P20618 241 aaKnown RBP11.01□□□□□ -0.65
VMP1-202ENST00000585847 CCL1P22362 96 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 CFPP27918 469 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 CDAP32320 146 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 SCAND1P57086 179 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 ARF1P84077 181 aaKnown RBP11.01□□□□□ -0.65
VMP1-202ENST00000585847 LSAMPQ13449 338 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 SNTB1Q13884 538 aaKnown RBP11.01□□□□□ -0.65
VMP1-202ENST00000585847 ZNF404Q494X3 552 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 ACSM3Q53FZ2 586 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 HSD17B12Q53GQ0 312 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 WDR38Q5JTN6 314 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 SFRP5Q5T4F7 317 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 C9orf135Q5VTT2 229 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 C22orf42Q6IC83 251 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 UNQ9370/PRO34162Q6UXP9 181 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 UNQ6126/PRO20091Q6UXV3 157 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 CFAP77Q6ZQR2 320 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 CEACAM19Q7Z692 300 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.01□□□□□ -0.65
VMP1-202ENST00000585847 LINC00346Q8IVM7 164 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 C1orf174Q8IYL3 243 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 FAM169BQ8N8A8 192 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 OR1F12Q8NHA8 337 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 S100ZQ8WXG8 99 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms