RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 BBS1Q8NFJ9 593 aa7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 TSPAN14Q8NG11 270 aa7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 OR52I1Q8NGK6 324 aa7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 OR52N5Q8NH56 324 aa7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ZFAND2BQ8WV99 257 aa7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 RNF133Q8WVZ7 376 aa7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 NABP1Q96AH0 204 aa7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 TSSK2Q96PF2 358 aa7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 COQ7Q99807 217 aa7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ATF6BQ99941 703 aa7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 TRAF4Q9BUZ4 470 aaPredicted RBP7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ZNF416Q9BWM5 594 aa7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 MRPS26Q9BYN8 205 aaKnown RBP7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 OPA3Q9H6K4 179 aa7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 RNF121Q9H920 327 aa7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 MED20Q9H944 212 aa7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ISYNA1Q9NPH2 558 aa7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 TRIM36Q9NQ86 728 aa7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 SLC17A5Q9NRA2 495 aa7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 DDX28Q9NUL7 540 aaKnown RBP7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ERVK13-1Q9NX77 482 aa7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ASH2LQ9UBL3 628 aa7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 PRSS50Q9UI38 385 aa7.57□□□□□ -1.2
PDLIM1P3-201ENST00000582370 VSTM5A8MXK1 200 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 SGCEO43556 437 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 XPNPEP2O43895 674 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 IGHV3-9P01782 118 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 SERPINA5P05154 406 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 CD1AP06126 327 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 CBR1P16152 277 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ZNF12P17014 697 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 CFL1P23528 166 aaKnown RBP7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 HSD11B1P28845 292 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 COMPP49747 757 aaPredicted RBP7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 MMP16P51512 607 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 RIDAP52758 137 aaKnown RBP7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 GBX2P52951 348 aaPredicted RBP7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 WNT4P56705 351 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 RAB1AP62820 205 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 EIF2B1Q14232 305 aaKnown RBP7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 SMN1Q16637 294 aaKnown RBP7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 TBRG1Q3YBR2 411 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ZNF672Q499Z4 452 aaPredicted RBP7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 CDONQ4KMG0 1287 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 PHYHD1Q5SRE7 291 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 LAIR2Q6ISS4 152 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ZNF322Q6U7Q0 402 aaPredicted RBP7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 DRAM2Q6UX65 266 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 STAC2Q6ZMT1 411 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ZNF367Q7RTV3 350 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 DPY19L4Q7Z388 723 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 DCXRQ7Z4W1 244 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 KRT77Q7Z794 578 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ZNF511Q8NB15 262 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 OR52H1Q8NGJ2 320 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 OR51L1Q8NGJ5 315 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 OR5L1Q8NGL2 311 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 LILRB1Q8NHL6 650 aaPredicted RBP7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 THEM6Q8WUY1 208 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 OR8B4Q96RC9 309 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 CCDC90BQ9GZT6 254 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 RGCCQ9H4X1 137 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 CHODLQ9H9P2 273 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 MRPL22Q9NWU5 206 aaKnown RBP7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 PLEK2Q9NYT0 353 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 CRNNQ9UBG3 495 aaPredicted RBP7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 SPEF1Q9Y4P9 236 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 CADP27708 2225 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ALPK2Q86TB3 2170 aa7.56□□□□□ -1.2
PDLIM1P3-201ENST00000582370 PLCE1Q9P212 2302 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 A0A1W2PQL4 384 aaPredicted RBP7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 METTL15A6NJ78 407 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 H3BSA7 217 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 M0R129 80 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ICMTO60725 284 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 RAD51DO75771 328 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 CLPTM1O96005 669 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 IGKV3-15P01624 115 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 CD3EP07766 207 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 MMP7P09237 267 aaPredicted RBP7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 H2BFMP0C1H6 154 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 GALP22466 123 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 CDAP32320 146 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 APLNRP35414 380 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 NAA10P41227 235 aaPredicted RBP7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 RANBP1P43487 201 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 TGM4P49221 684 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 CCR9P51686 369 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 TPTEP56180 551 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 DEFA6Q01524 100 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 ENDOGQ14249 297 aaKnown RBP7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 PPA1Q15181 289 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 SPHARQ15513 63 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 TBC1D28Q2M2D7 210 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 PRR31Q5SQ13 230 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 NCMAPQ5T1S8 102 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 FDX2Q6P4F2 183 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 SEZ6L2Q6UXD5 910 aa7.55□□□□□ -1.2
PDLIM1P3-201ENST00000582370 TMEM108Q6UXF1 575 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms