RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 MED18Q9BUE0 208 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ABHD6Q9BV23 337 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ADI1Q9BV57 179 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 CDADC1Q9BWV3 514 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 JAM3Q9BX67 310 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 C1QTNF6Q9BXI9 259 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ANKRD60Q9BZ19 345 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 NDEL1Q9GZM8 345 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF556Q9HAH1 456 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 FKBP14Q9NWM8 211 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 PAK1IP1Q9NWT1 392 aaPredicted RBP3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 TVP23BQ9NYZ1 205 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 DNAJC27Q9NZQ0 273 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF319Q9P2F9 582 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ASH2LQ9UBL3 628 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 NDRG3Q9UGV2 375 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 ENOPH1Q9UHY7 261 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 KCNG2Q9UJ96 466 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 MOKQ9UQ07 419 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 EXOGQ9Y2C4 368 aaKnown RBP3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 NOTCH2Q04721 2471 aa3.25□□□□□ -1.89
SMARCE1-215ENST00000578995 NSD1Q96L73 2696 aaPredicted RBP3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 C12orf71A8MTZ7 269 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 M0R1B8 84 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 HS3ST1O14792 307 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 MAGEB4O15481 346 aaPredicted RBP3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 SGCEO43556 437 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 TLX2O43763 284 aaPredicted RBP3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 DOK2O60496 412 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 KRT33AO76009 404 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 ATE1O95260 518 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 PNPP00491 289 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 IFNGP01579 166 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 SOD3P08294 240 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 HTR1AP08908 422 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 ACSM4P0C7M7 580 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 LIMS3P0CW19 117 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 LIMS4P0CW20 117 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 DBTP11182 482 aaKnown RBP3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 CCL2P13500 99 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF250P15622 560 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 PAX1P15863 534 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 CD53P19397 219 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 NR4A1P22736 598 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 MYF6P23409 242 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 PAX7P23759 505 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 STOMP27105 288 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 PCSK6P29122 969 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 SSTR2P30874 369 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 THBS4P35443 961 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 MPV17P39210 176 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 NAA10P41227 235 aaPredicted RBP3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 CENPAP49450 140 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 ENTPD1P49961 510 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 MMP15P51511 669 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 HCCSP53701 268 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 NR1H2P55055 460 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 UBE2NP61088 152 aaKnown RBP3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 SCRN3Q0VDG4 424 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 TMED1Q13445 227 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 IL18R1Q13478 541 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 TESK1Q15569 626 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 EFNB3Q15768 340 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 SNAPC1Q16533 368 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 SGCAQ16586 387 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 SNAI3Q3KNW1 292 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 ALKBH6Q3KRA9 238 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 SLC36A2Q495M3 483 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 ELFN2Q5R3F8 820 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 C6orf52Q5T4I8 152 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 DNM1P34Q6PK57 102 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 TMEM108Q6UXF1 575 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 PAMR1Q6UXH9 720 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 IZUMO2Q6UXV1 221 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 RHOUQ7L0Q8 258 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF771Q7L3S4 317 aaPredicted RBP3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 SHFQ7M4L6 423 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 KRT74Q7RTS7 529 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 SLC16A9Q7RTY1 509 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 DPY19L4Q7Z388 723 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 DCXRQ7Z4W1 244 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 NAA40Q86UY6 237 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF611Q8N823 705 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 SLC30A7Q8NEW0 376 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 PROKR2Q8NFJ6 384 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 OR4F15Q8NGB8 312 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 OR1F12Q8NHA8 337 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 CNIH3Q8TBE1 160 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 SGCDQ92629 289 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 MBD6Q96DN6 1003 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 MUCL1Q96DR8 90 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 LGALS12Q96DT0 336 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 SLAMF6Q96DU3 332 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 LRRC46Q96FV0 321 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 MARS2Q96GW9 593 aaKnown RBP3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 LURAP1Q96LR2 239 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 OR8B4Q96RC9 309 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 INTS14Q96SY0 518 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 DOK1Q99704 481 aa3.24□□□□□ -1.89
SMARCE1-215ENST00000578995 TRAF4Q9BUZ4 470 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms