RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 KRR1Q13601 381 aaKnown RBP16.37■□□□□ 0.21
CCDC40-206ENST00000572083 GK2Q14410 553 aaPredicted RBP16.37■□□□□ 0.21
CCDC40-206ENST00000572083 KCNJ8Q15842 424 aa16.37■□□□□ 0.21
CCDC40-206ENST00000572083 MEP1BQ16820 701 aa16.37■□□□□ 0.21
CCDC40-206ENST00000572083 CYBRD1Q53TN4 286 aa16.37■□□□□ 0.21
CCDC40-206ENST00000572083 COQ7Q99807 217 aa16.37■□□□□ 0.21
CCDC40-206ENST00000572083 HDHD2Q9H0R4 259 aa16.37■□□□□ 0.21
CCDC40-206ENST00000572083 RPS6KA6Q9UK32 745 aa16.37■□□□□ 0.21
CCDC40-206ENST00000572083 VPREB3Q9UKI3 123 aa16.37■□□□□ 0.21
CCDC40-206ENST00000572083 FAM96BQ9Y3D0 163 aa16.37■□□□□ 0.21
CCDC40-206ENST00000572083 LHFPL6Q9Y693 200 aa16.37■□□□□ 0.21
CCDC40-206ENST00000572083 RYR3Q15413 4870 aa16.37■□□□□ 0.21
CCDC40-206ENST00000572083 AHCYL1O43865 530 aa16.36■□□□□ 0.21
CCDC40-206ENST00000572083 OR10H3O60404 316 aa16.36■□□□□ 0.21
CCDC40-206ENST00000572083 IFNA14P01570 189 aa16.36■□□□□ 0.21
CCDC40-206ENST00000572083 IFNA8P32881 189 aa16.36■□□□□ 0.21
CCDC40-206ENST00000572083 CORO6Q6QEF8 472 aa16.36■□□□□ 0.21
CCDC40-206ENST00000572083 BTN2A1Q7KYR7 527 aa16.36■□□□□ 0.21
CCDC40-206ENST00000572083 VMO1Q7Z5L0 202 aa16.36■□□□□ 0.21
CCDC40-206ENST00000572083 OFCC1Q8IZS5 231 aa16.36■□□□□ 0.21
CCDC40-206ENST00000572083 FN3KRPQ9HA64 309 aa16.36■□□□□ 0.21
CCDC40-206ENST00000572083 TMBIM4Q9HC24 238 aa16.36■□□□□ 0.21
CCDC40-206ENST00000572083 ZNRD1Q9P1U0 126 aa16.36■□□□□ 0.21
CCDC40-206ENST00000572083 SNX13Q9Y5W8 968 aa16.36■□□□□ 0.21
CCDC40-206ENST00000572083 BTBD17A6NE02 478 aa16.35■□□□□ 0.21
CCDC40-206ENST00000572083 TSPAN9O75954 239 aa16.35■□□□□ 0.21
CCDC40-206ENST00000572083 GYPAP02724 150 aa16.35■□□□□ 0.21
CCDC40-206ENST00000572083 OPN1MWP04001 364 aa16.35■□□□□ 0.21
CCDC40-206ENST00000572083 OPN1MW2P0DN77 364 aa16.35■□□□□ 0.21
CCDC40-206ENST00000572083 OPN1MW3P0DN78 364 aa16.35■□□□□ 0.21
CCDC40-206ENST00000572083 PRB3Q04118 309 aaPredicted RBP16.35■□□□□ 0.21
CCDC40-206ENST00000572083 OR8G1Q15617 311 aa16.35■□□□□ 0.21
CCDC40-206ENST00000572083 RSPO1Q2MKA7 263 aaPredicted RBP16.35■□□□□ 0.21
CCDC40-206ENST00000572083 ZBED5Q49AG3 693 aa16.35■□□□□ 0.21
CCDC40-206ENST00000572083 TBPL2Q6SJ96 375 aa16.35■□□□□ 0.21
CCDC40-206ENST00000572083 FAM156AQ8NDB6 213 aa16.35■□□□□ 0.21
CCDC40-206ENST00000572083 GJC3Q8NFK1 279 aa16.35■□□□□ 0.21
CCDC40-206ENST00000572083 SLCO4A1Q96BD0 722 aa16.35■□□□□ 0.21
CCDC40-206ENST00000572083 NUAK2Q9H093 628 aa16.35■□□□□ 0.21
CCDC40-206ENST00000572083 PLXNB1O43157 2135 aa16.34■□□□□ 0.21
CCDC40-206ENST00000572083 OOEPA6NGQ2 149 aa16.34■□□□□ 0.21
CCDC40-206ENST00000572083 FBP1P09467 338 aa16.34■□□□□ 0.21
CCDC40-206ENST00000572083 CA6P23280 308 aa16.34■□□□□ 0.21
CCDC40-206ENST00000572083 CENPAP49450 140 aa16.34■□□□□ 0.21
CCDC40-206ENST00000572083 HIST1H3AP68431 136 aa16.34■□□□□ 0.21
CCDC40-206ENST00000572083 CYLC2Q14093 348 aaPredicted RBP16.34■□□□□ 0.21
CCDC40-206ENST00000572083 TRAM2Q15035 370 aa16.34■□□□□ 0.21
CCDC40-206ENST00000572083 HIST2H3PS2Q5TEC6 136 aa16.34■□□□□ 0.21
CCDC40-206ENST00000572083 ZNF730Q6ZMV8 503 aa16.34■□□□□ 0.21
CCDC40-206ENST00000572083 COLCA1Q6ZS62 124 aa16.34■□□□□ 0.21
CCDC40-206ENST00000572083 HIST2H3AQ71DI3 136 aa16.34■□□□□ 0.21
CCDC40-206ENST00000572083 FGFRL1Q8N441 504 aa16.34■□□□□ 0.21
CCDC40-206ENST00000572083 C11orf44Q8N8P7 122 aa16.34■□□□□ 0.21
CCDC40-206ENST00000572083 MRAPQ8TCY5 172 aa16.34■□□□□ 0.21
CCDC40-206ENST00000572083 TSPEARQ8WU66 669 aa16.34■□□□□ 0.21
CCDC40-206ENST00000572083 SPRYD4Q8WW59 207 aaPredicted RBP16.34■□□□□ 0.21
CCDC40-206ENST00000572083 ST8SIA4Q92187 359 aa16.34■□□□□ 0.21
CCDC40-206ENST00000572083 ADAT1Q9BUB4 502 aaKnown RBP16.34■□□□□ 0.21
CCDC40-206ENST00000572083 FNDC11Q9BVV2 318 aa16.34■□□□□ 0.21
CCDC40-206ENST00000572083 NMNAT1Q9HAN9 279 aaPredicted RBP16.34■□□□□ 0.21
CCDC40-206ENST00000572083 VSX1Q9NZR4 365 aaPredicted RBP16.34■□□□□ 0.21
CCDC40-206ENST00000572083 ONECUT1Q9UBC0 465 aa16.34■□□□□ 0.21
CCDC40-206ENST00000572083 A0A087WUU8 490 aa16.33■□□□□ 0.2
CCDC40-206ENST00000572083 TRAV38-1A0A0B4J264 116 aa16.33■□□□□ 0.2
CCDC40-206ENST00000572083 F5H5K5 113 aa16.33■□□□□ 0.2
CCDC40-206ENST00000572083 FXYD1O00168 92 aa16.33■□□□□ 0.2
CCDC40-206ENST00000572083 SOCS2O14508 198 aa16.33■□□□□ 0.2
CCDC40-206ENST00000572083 DVL1O14640 695 aa16.33■□□□□ 0.2
CCDC40-206ENST00000572083 FFAR1O14842 300 aa16.33■□□□□ 0.2
CCDC40-206ENST00000572083 ACSM4P0C7M7 580 aa16.33■□□□□ 0.2
CCDC40-206ENST00000572083 SDHAP31040 664 aa16.33■□□□□ 0.2
CCDC40-206ENST00000572083 DBPQ10586 325 aaPredicted RBP16.33■□□□□ 0.2
CCDC40-206ENST00000572083 POU4F2Q12837 409 aa16.33■□□□□ 0.2
CCDC40-206ENST00000572083 KCNMB1Q16558 191 aa16.33■□□□□ 0.2
CCDC40-206ENST00000572083 CDONQ4KMG0 1287 aa16.33■□□□□ 0.2
CCDC40-206ENST00000572083 ERICH5Q6P6B1 374 aa16.33■□□□□ 0.2
CCDC40-206ENST00000572083 Q6ZTK2 550 aa16.33■□□□□ 0.2
CCDC40-206ENST00000572083 PTCHD4Q6ZW05 846 aa16.33■□□□□ 0.2
CCDC40-206ENST00000572083 PGAP1Q75T13 922 aa16.33■□□□□ 0.2
CCDC40-206ENST00000572083 REC114Q7Z4M0 266 aa16.33■□□□□ 0.2
CCDC40-206ENST00000572083 OR8J3Q8NGG0 315 aa16.33■□□□□ 0.2
CCDC40-206ENST00000572083 ACOT11Q8WXI4 607 aaPredicted RBP16.33■□□□□ 0.2
CCDC40-206ENST00000572083 ZNF583Q96ND8 569 aa16.33■□□□□ 0.2
CCDC40-206ENST00000572083 TSSK2Q96PF2 358 aa16.33■□□□□ 0.2
CCDC40-206ENST00000572083 DNAJB11Q9UBS4 358 aa16.33■□□□□ 0.2
CCDC40-206ENST00000572083 RPUSD1Q9UJJ7 312 aaKnown RBP16.33■□□□□ 0.2
CCDC40-206ENST00000572083 A0A1B0GVI7 797 aa16.32■□□□□ 0.2
CCDC40-206ENST00000572083 A0A1W2PRD5 423 aa16.32■□□□□ 0.2
CCDC40-206ENST00000572083 A0A1W2PRF3 423 aa16.32■□□□□ 0.2
CCDC40-206ENST00000572083 A0A1W2PRM7 423 aa16.32■□□□□ 0.2
CCDC40-206ENST00000572083 KDELR2P33947 212 aa16.32■□□□□ 0.2
CCDC40-206ENST00000572083 TGFBR2P37173 567 aa16.32■□□□□ 0.2
CCDC40-206ENST00000572083 MALLQ13021 153 aa16.32■□□□□ 0.2
CCDC40-206ENST00000572083 HERPUD1Q15011 391 aa16.32■□□□□ 0.2
CCDC40-206ENST00000572083 SLC35E4Q6ICL7 350 aa16.32■□□□□ 0.2
CCDC40-206ENST00000572083 CFAP77Q6ZQR2 320 aa16.32■□□□□ 0.2
CCDC40-206ENST00000572083 TMPRSS11FQ6ZWK6 438 aa16.32■□□□□ 0.2
CCDC40-206ENST00000572083 MBOAT2Q6ZWT7 520 aa16.32■□□□□ 0.2
CCDC40-206ENST00000572083 VTCN1Q7Z7D3 282 aa16.32■□□□□ 0.2
CCDC40-206ENST00000572083 NAA40Q86UY6 237 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms