RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 SELENOFO60613 162 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 SULT1C4O75897 302 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 INMTO95050 263 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 IGHV4-39P01824 125 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 LCKP06239 509 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 MRPL3P09001 348 aaKnown RBP11.59□□□□□ -0.55
CLK3-218ENST00000566926 TACSTD2P09758 323 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 ZNF35P13682 527 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 LAP3P28838 519 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 THBS4P35443 961 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 TMBIM6P55061 237 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 GP2P55259 537 aaKnown RBP11.59□□□□□ -0.55
CLK3-218ENST00000566926 DSCR9P59020 149 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 PCBD1P61457 104 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 FMODQ06828 376 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 SNTB2Q13425 540 aaKnown RBP11.59□□□□□ -0.55
CLK3-218ENST00000566926 GPR50Q13585 617 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 ADIPOQQ15848 244 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 KCNMB1Q16558 191 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 PCK2Q16822 640 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 SWI5Q1ZZU3 235 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 TBC1D28Q2M2D7 210 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 FAM27BQ5VT28 67 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 SLC18B1Q6NT16 456 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 PLEKHG7Q6ZR37 379 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 RHOUQ7L0Q8 258 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 FAM220AQ7Z4H9 259 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 ALDH16A1Q8IZ83 802 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 OR10H5Q8NGA6 315 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 OTOSQ8NHW6 89 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 RAB2BQ8WUD1 216 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 SNX33Q8WV41 574 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 MS4A3Q96HJ5 214 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 ZNF649Q9BS31 505 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 CDH20Q9HBT6 801 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 CLEC2DQ9UHP7 191 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 LAMP5Q9UJQ1 280 aa11.59□□□□□ -0.55
CLK3-218ENST00000566926 COA3Q9Y2R0 106 aaPredicted RBP11.59□□□□□ -0.55
CLK3-218ENST00000566926 CCRL2O00421 344 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 SSX4O60224 188 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 APOL3O95236 402 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 ERCC1P07992 297 aaPredicted RBP11.58□□□□□ -0.56
CLK3-218ENST00000566926 CST2P09228 141 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 CSF3P09919 207 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 PATE4P0C8F1 98 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 GAAP10253 952 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 ALOX5APP20292 161 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 CDAP32320 146 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 APLNRP35414 380 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 GLRXP35754 106 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 NAA10P41227 235 aaPredicted RBP11.58□□□□□ -0.56
CLK3-218ENST00000566926 EVX1P49640 407 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 EFNA4P52798 201 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 LSM6P62312 80 aaKnown RBP11.58□□□□□ -0.56
CLK3-218ENST00000566926 MST1LQ2TV78 715 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 CDONQ4KMG0 1287 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 CCDC58Q4VC31 144 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 ARMCX4Q5H9R4 360 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 KCTD18Q6PI47 426 aaPredicted RBP11.58□□□□□ -0.56
CLK3-218ENST00000566926 CLEC2AQ6UVW9 174 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 UNQ6126/PRO20091Q6UXV3 157 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 FOXL2NBQ6ZUU3 175 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 SYT9Q86SS6 491 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 LHFPL3Q86UP9 236 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 ZNF511Q8NB15 262 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 SLC30A7Q8NEW0 376 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 OR6N2Q8NGY6 317 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 FGFBP3Q8TAT2 258 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 NABP1Q96AH0 204 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 COX4I2Q96KJ9 171 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 PLK3Q9H4B4 646 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 BABAM2Q9NXR7 383 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 GDF2Q9UK05 429 aaPredicted RBP11.58□□□□□ -0.56
CLK3-218ENST00000566926 UGT2A1Q9Y4X1 527 aa11.58□□□□□ -0.56
CLK3-218ENST00000566926 C2CD3Q4AC94 2353 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 CR1P17927 2039 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 IGKV1D-43A0A0B4J1Z2 117 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 A0A1W2PPL8 197 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 TRIM64BA6NI03 449 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 ZNF593O00488 134 aaPredicted RBP11.57□□□□□ -0.56
CLK3-218ENST00000566926 TFP02787 698 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 KRT8P05787 483 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 ADRA2AP08913 450 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 MMP7P09237 267 aaPredicted RBP11.57□□□□□ -0.56
CLK3-218ENST00000566926 HSMCR30P0CW71 290 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 MSR1P21757 451 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 PSMA1P25786 263 aaKnown RBP11.57□□□□□ -0.56
CLK3-218ENST00000566926 RAD52P43351 418 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 RGS6P49758 472 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 PPOXP50336 477 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 SELENOVP59797 346 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 ROM1Q03395 351 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 ZNF85Q03923 595 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 TNK1Q13470 666 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 TPBGQ13641 420 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 DEGS2Q6QHC5 323 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 ANKRD13BQ86YJ7 626 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 ZNF584Q8IVC4 421 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 ZNF485Q8NCK3 441 aa11.57□□□□□ -0.56
CLK3-218ENST00000566926 ZNRF4Q8WWF5 429 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms