RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 VDAC2P45880 294 aaPredicted RBP4.4□□□□□ -1.71
KARS-208ENST00000566772 GPR6P46095 362 aaPredicted RBP4.4□□□□□ -1.71
KARS-208ENST00000566772 RPL34P49207 117 aaKnown RBP4.4□□□□□ -1.71
KARS-208ENST00000566772 STXBP1P61764 594 aaKnown RBP4.4□□□□□ -1.71
KARS-208ENST00000566772 PGGHGQ32M88 737 aa4.4□□□□□ -1.71
KARS-208ENST00000566772 TFAP2EQ6VUC0 442 aa4.4□□□□□ -1.71
KARS-208ENST00000566772 CDC20BQ86Y33 519 aa4.4□□□□□ -1.71
KARS-208ENST00000566772 ST13P4Q8IZP2 240 aaPredicted RBP4.4□□□□□ -1.71
KARS-208ENST00000566772 ACOT11Q8WXI4 607 aaPredicted RBP4.4□□□□□ -1.71
KARS-208ENST00000566772 DNASE2BQ8WZ79 361 aa4.4□□□□□ -1.71
KARS-208ENST00000566772 TMEM54Q969K7 222 aa4.4□□□□□ -1.71
KARS-208ENST00000566772 VSIG2Q96IQ7 327 aa4.4□□□□□ -1.71
KARS-208ENST00000566772 PSMB7Q99436 277 aa4.4□□□□□ -1.71
KARS-208ENST00000566772 SIAEQ9HAT2 523 aa4.4□□□□□ -1.71
KARS-208ENST00000566772 EML4Q9HC35 981 aaKnown RBP4.4□□□□□ -1.71
KARS-208ENST00000566772 C6orf50Q9HD87 102 aa4.4□□□□□ -1.71
KARS-208ENST00000566772 EXD2Q9NVH0 621 aa4.4□□□□□ -1.71
KARS-208ENST00000566772 ADA2Q9NZK5 511 aa4.4□□□□□ -1.71
KARS-208ENST00000566772 DCDC2Q9UHG0 476 aa4.4□□□□□ -1.71
KARS-208ENST00000566772 PRG3Q9Y2Y8 225 aaPredicted RBP4.4□□□□□ -1.71
KARS-208ENST00000566772 NOSIPQ9Y314 301 aaKnown RBP4.4□□□□□ -1.71
KARS-208ENST00000566772 FLVCR1Q9Y5Y0 555 aa4.4□□□□□ -1.71
KARS-208ENST00000566772 CLUHO75153 1309 aa4.4□□□□□ -1.71
KARS-208ENST00000566772 DCHS1Q96JQ0 3298 aa4.4□□□□□ -1.71
KARS-208ENST00000566772 KMT2BQ9UMN6 2715 aaPredicted RBP4.39□□□□□ -1.71
KARS-208ENST00000566772 MIA3Q5JRA6 1907 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 CEP250Q9BV73 2442 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 IGLV8-61A0A075B6I0 122 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 IGKV6D-21A0A0A0MT36 114 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 KLF18A0A0U1RQI7 1052 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 RAB19A4D1S5 217 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 TMEM150BA6NC51 233 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 PDZK1P1A8MUH7 402 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 C12orf77C9JDV5 145 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 F6UB75 175 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 PLPP1O14494 284 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 SLC19A2O60779 497 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 ENTPD5O75356 428 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 OXTP01178 125 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 IGHV3-13P01766 116 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 GDF1P27539 372 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 RFC3P40938 356 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 UGT2B15P54855 530 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 SLC25A11Q02978 314 aaKnown RBP4.39□□□□□ -1.71
KARS-208ENST00000566772 ZNF92Q03936 586 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 ATP6AP1Q15904 470 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 PSMD5Q16401 504 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 C1orf146Q5VVC0 180 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 ZNF620Q6ZNG0 422 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 NDUFAF7Q7L592 441 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 COMTD1Q86VU5 262 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 TMEM252Q8N6L7 170 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 C9orf106Q8NAJ2 232 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 CCDC12Q8WUD4 166 aaPredicted RBP4.39□□□□□ -1.71
KARS-208ENST00000566772 FAM131CQ96AQ9 280 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 B3GALT6Q96L58 329 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 ZNF184Q99676 751 aaPredicted RBP4.39□□□□□ -1.71
KARS-208ENST00000566772 SOSTQ9BQB4 213 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 APOL2Q9BQE5 337 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 TRIM51Q9BSJ1 452 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 RAB1BQ9H0U4 201 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 Q9H3A6 140 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 IL26Q9NPH9 171 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 NRBP2Q9NSY0 501 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 QPCTLQ9NXS2 382 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 ADAM22Q9P0K1 906 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 CTSFQ9UBX1 484 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 ZNF580Q9UK33 172 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 CHD6Q8TD26 2715 aa4.39□□□□□ -1.71
KARS-208ENST00000566772 TDRD15B5MCY1 1934 aaKnown RBP4.38□□□□□ -1.71
KARS-208ENST00000566772 GON4LQ3T8J9 2241 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 CEP295Q9C0D2 2601 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 IGKV1D-13A0A0B4J2D9 117 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 A0A0G2JLM5 398 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 TSPAN11A1L157 253 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 ZNF726A6NNF4 738 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 IQCF5A8MTL0 148 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 LYPLA1O75608 230 aaPredicted RBP4.38□□□□□ -1.71
KARS-208ENST00000566772 LSM8O95777 96 aaKnown RBP4.38□□□□□ -1.71
KARS-208ENST00000566772 IGHV3-48P01763 117 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 HBE1P02100 147 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 IGKV1-13P0DP09 117 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 CCR8P51685 355 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 SUB1P53999 127 aaKnown RBP eCLIP4.38□□□□□ -1.71
KARS-208ENST00000566772 PSMC5P62195 406 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 CSNK1G2P78368 415 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 TIMM50Q3ZCQ8 353 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 C1orf100Q5SVJ3 147 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 LINC00336Q6ZUF6 198 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 SNX20Q7Z614 316 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 THOC6Q86W42 341 aaKnown RBP4.38□□□□□ -1.71
KARS-208ENST00000566772 RBM45Q8IUH3 476 aaKnown RBP4.38□□□□□ -1.71
KARS-208ENST00000566772 ZNF547Q8IVP9 402 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 OR51F2Q8NH61 342 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 OR9G1Q8NH87 305 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 GTSF1Q8WW33 167 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 NDRG1Q92597 394 aaKnown RBP4.38□□□□□ -1.71
KARS-208ENST00000566772 EEF1AKMT3Q96AZ1 226 aa4.38□□□□□ -1.71
KARS-208ENST00000566772 RIOK2Q9BVS4 552 aaKnown RBP4.38□□□□□ -1.71
KARS-208ENST00000566772 OSBPL10Q9BXB5 764 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms