RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 UBE2NP61088 152 aaKnown RBP8.84□□□□□ -0.99
SMG1-208ENST00000563448 FAM57BQ71RH2 274 aa8.84□□□□□ -0.99
SMG1-208ENST00000563448 CCDC36Q8IYA8 594 aa8.84□□□□□ -0.99
SMG1-208ENST00000563448 C17orf78Q8N4C9 275 aa8.84□□□□□ -0.99
SMG1-208ENST00000563448 OR51A4Q8NGJ6 313 aa8.84□□□□□ -0.99
SMG1-208ENST00000563448 ZFAND2BQ8WV99 257 aa8.84□□□□□ -0.99
SMG1-208ENST00000563448 PPIL3Q9H2H8 161 aaKnown RBP8.84□□□□□ -0.99
SMG1-208ENST00000563448 MOB1AQ9H8S9 216 aa8.84□□□□□ -0.99
SMG1-208ENST00000563448 ATPIF1Q9UII2 106 aa8.84□□□□□ -0.99
SMG1-208ENST00000563448 IGSF10Q6WRI0 2623 aa8.84□□□□□ -1
SMG1-208ENST00000563448 TRBV5-5A0A0J9YX44 114 aa8.83□□□□□ -1
SMG1-208ENST00000563448 ACOD1A6NK06 481 aa8.83□□□□□ -1
SMG1-208ENST00000563448 P2RY10O00398 339 aa8.83□□□□□ -1
SMG1-208ENST00000563448 SERPINA3P01011 423 aa8.83□□□□□ -1
SMG1-208ENST00000563448 APOC1P02654 83 aa8.83□□□□□ -1
SMG1-208ENST00000563448 ISG15P05161 165 aa8.83□□□□□ -1
SMG1-208ENST00000563448 PSMB1P20618 241 aaKnown RBP8.83□□□□□ -1
SMG1-208ENST00000563448 SLC6A9P48067 706 aa8.83□□□□□ -1
SMG1-208ENST00000563448 TPTEP56180 551 aa8.83□□□□□ -1
SMG1-208ENST00000563448 ADORA2A-AS1P86434 159 aa8.83□□□□□ -1
SMG1-208ENST00000563448 FAM27E3Q08E93 113 aa8.83□□□□□ -1
SMG1-208ENST00000563448 ZMAT1Q5H9K5 638 aa8.83□□□□□ -1
SMG1-208ENST00000563448 FAM27D1Q5T7N8 215 aa8.83□□□□□ -1
SMG1-208ENST00000563448 DRAM2Q6UX65 266 aa8.83□□□□□ -1
SMG1-208ENST00000563448 CEACAM19Q7Z692 300 aa8.83□□□□□ -1
SMG1-208ENST00000563448 MYPOPQ86VE0 399 aaPredicted RBP8.83□□□□□ -1
SMG1-208ENST00000563448 FJX1Q86VR8 437 aa8.83□□□□□ -1
SMG1-208ENST00000563448 MS4A3Q96HJ5 214 aa8.83□□□□□ -1
SMG1-208ENST00000563448 POM121L2Q96KW2 1035 aa8.83□□□□□ -1
SMG1-208ENST00000563448 OR14A2Q96R54 314 aa8.83□□□□□ -1
SMG1-208ENST00000563448 DIDO1Q9BTC0 2240 aaKnown RBP8.83□□□□□ -1
SMG1-208ENST00000563448 A0A1B0GTI1 187 aa8.83□□□□□ -1
SMG1-208ENST00000563448 IQCMA0A1B0GVH7 501 aa8.83□□□□□ -1
SMG1-208ENST00000563448 A0A1W2PPK0 400 aa8.83□□□□□ -1
SMG1-208ENST00000563448 SHISA3A0PJX4 238 aa8.83□□□□□ -1
SMG1-208ENST00000563448 OR5H1A6NKK0 313 aa8.83□□□□□ -1
SMG1-208ENST00000563448 ZNF879B4DU55 563 aa8.83□□□□□ -1
SMG1-208ENST00000563448 AGFG2O95081 481 aa8.83□□□□□ -1
SMG1-208ENST00000563448 CELA3BP08861 270 aa8.83□□□□□ -1
SMG1-208ENST00000563448 UBCP0CG48 685 aaKnown RBP8.83□□□□□ -1
SMG1-208ENST00000563448 CCL2P13500 99 aa8.83□□□□□ -1
SMG1-208ENST00000563448 CBR1P16152 277 aa8.83□□□□□ -1
SMG1-208ENST00000563448 ZNF14P17017 642 aaPredicted RBP8.83□□□□□ -1
SMG1-208ENST00000563448 IL32P24001 234 aa8.83□□□□□ -1
SMG1-208ENST00000563448 STOMP27105 288 aa8.83□□□□□ -1
SMG1-208ENST00000563448 HOXC12P31275 282 aa8.83□□□□□ -1
SMG1-208ENST00000563448 UGT2B10P36537 528 aa8.83□□□□□ -1
SMG1-208ENST00000563448 SERPINB10P48595 397 aa8.83□□□□□ -1
SMG1-208ENST00000563448 PLP2Q04941 152 aa8.83□□□□□ -1
SMG1-208ENST00000563448 IGFBP7Q16270 282 aa8.83□□□□□ -1
SMG1-208ENST00000563448 SNAI3Q3KNW1 292 aa8.83□□□□□ -1
SMG1-208ENST00000563448 Q499Y3 187 aa8.83□□□□□ -1
SMG1-208ENST00000563448 TMEM244Q5VVB8 128 aa8.83□□□□□ -1
SMG1-208ENST00000563448 ZNF704Q6ZNC4 412 aaPredicted RBP8.83□□□□□ -1
SMG1-208ENST00000563448 USP43Q70EL4 1123 aa8.83□□□□□ -1
SMG1-208ENST00000563448 S100PBPQ96BU1 408 aa8.83□□□□□ -1
SMG1-208ENST00000563448 ORAI1Q96D31 301 aa8.83□□□□□ -1
SMG1-208ENST00000563448 PGAM5Q96HS1 289 aa8.83□□□□□ -1
SMG1-208ENST00000563448 KCTD7Q96MP8 289 aa8.83□□□□□ -1
SMG1-208ENST00000563448 SOX7Q9BT81 388 aa8.83□□□□□ -1
SMG1-208ENST00000563448 DCSTAMPQ9H295 470 aa8.83□□□□□ -1
SMG1-208ENST00000563448 SLC24A3Q9HC58 644 aa8.83□□□□□ -1
SMG1-208ENST00000563448 ELOVL5Q9NYP7 299 aa8.83□□□□□ -1
SMG1-208ENST00000563448 GSTK1Q9Y2Q3 226 aa8.83□□□□□ -1
SMG1-208ENST00000563448 LOC107986453A0A1B0GWG9 222 aa8.82□□□□□ -1
SMG1-208ENST00000563448 PIN1P1O15428 100 aa8.82□□□□□ -1
SMG1-208ENST00000563448 TBX1O43435 398 aa8.82□□□□□ -1
SMG1-208ENST00000563448 GATBO75879 557 aaKnown RBP8.82□□□□□ -1
SMG1-208ENST00000563448 IGLV3-1P01715 115 aa8.82□□□□□ -1
SMG1-208ENST00000563448 PRB1P04280 392 aa8.82□□□□□ -1
SMG1-208ENST00000563448 SERPINA5P05154 406 aa8.82□□□□□ -1
SMG1-208ENST00000563448 OCM2P0CE71 109 aa8.82□□□□□ -1
SMG1-208ENST00000563448 ZNF182P17025 639 aaPredicted RBP8.82□□□□□ -1
SMG1-208ENST00000563448 ACHEP22303 614 aa8.82□□□□□ -1
SMG1-208ENST00000563448 GNLYP22749 145 aa8.82□□□□□ -1
SMG1-208ENST00000563448 UQCRFS1P47985 274 aa8.82□□□□□ -1
SMG1-208ENST00000563448 SOX2P48431 317 aa8.82□□□□□ -1
SMG1-208ENST00000563448 TLE1Q04724 770 aa8.82□□□□□ -1
SMG1-208ENST00000563448 GALNT11Q8NCW6 608 aa8.82□□□□□ -1
SMG1-208ENST00000563448 OR51E1Q8TCB6 317 aa8.82□□□□□ -1
SMG1-208ENST00000563448 DYNC2LI1Q8TCX1 351 aa8.82□□□□□ -1
SMG1-208ENST00000563448 GPR148Q8TDV2 347 aa8.82□□□□□ -1
SMG1-208ENST00000563448 CCDC120Q96HB5 630 aa8.82□□□□□ -1
SMG1-208ENST00000563448 DERL3Q96Q80 235 aa8.82□□□□□ -1
SMG1-208ENST00000563448 DCUN1D5Q9BTE7 237 aa8.82□□□□□ -1
SMG1-208ENST00000563448 C1QTNF6Q9BXI9 259 aa8.82□□□□□ -1
SMG1-208ENST00000563448 OBP2BQ9NPH6 170 aa8.82□□□□□ -1
SMG1-208ENST00000563448 ETAA1Q9NY74 926 aa8.82□□□□□ -1
SMG1-208ENST00000563448 AMDHD2Q9Y303 409 aa8.82□□□□□ -1
SMG1-208ENST00000563448 SLC25A15Q9Y619 301 aa8.82□□□□□ -1
SMG1-208ENST00000563448 C5orf49A4QMS7 147 aa8.81□□□□□ -1
SMG1-208ENST00000563448 LMX1BO60663 402 aa8.81□□□□□ -1
SMG1-208ENST00000563448 CDRT1O95170 752 aa8.81□□□□□ -1
SMG1-208ENST00000563448 IGKV3-15P01624 115 aa8.81□□□□□ -1
SMG1-208ENST00000563448 LCATP04180 440 aa8.81□□□□□ -1
SMG1-208ENST00000563448 UCHL1P09936 223 aa8.81□□□□□ -1
SMG1-208ENST00000563448 CCNOP22674 350 aa8.81□□□□□ -1
SMG1-208ENST00000563448 CCKARP32238 428 aa8.81□□□□□ -1
SMG1-208ENST00000563448 APLNRP35414 380 aa8.81□□□□□ -1
SMG1-208ENST00000563448 RPS19P39019 145 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms