RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 KIF26BQ2KJY2 2108 aa11.65□□□□□ -0.55
USB1-207ENST00000563149 IGKV1D-43A0A0B4J1Z2 117 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 RAB19A4D1S5 217 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 LIPT2A6NK58 231 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 MPTX1A8MV57 137 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 CSN2P05814 226 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 GP1BAP07359 652 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 GSTP1P09211 210 aaKnown RBP11.64□□□□□ -0.55
USB1-207ENST00000563149 NAT1P18440 290 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 LUMP51884 338 aaPredicted RBP11.64□□□□□ -0.55
USB1-207ENST00000563149 CLDN6P56747 220 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 SNTB1Q13884 538 aaKnown RBP11.64□□□□□ -0.55
USB1-207ENST00000563149 C17orf107Q6ZR85 190 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 LANCL3Q6ZV70 420 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 PRSS58Q8IYP2 241 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 MRGPRFQ96AM1 343 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 ZNF501Q96CX3 271 aaPredicted RBP11.64□□□□□ -0.55
USB1-207ENST00000563149 ADAT3Q96EY9 351 aaPredicted RBP11.64□□□□□ -0.55
USB1-207ENST00000563149 ARPC5LQ9BPX5 153 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 ZNF471Q9BX82 626 aaPredicted RBP11.64□□□□□ -0.55
USB1-207ENST00000563149 TAS2R3Q9NYW6 316 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 CTSFQ9UBX1 484 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 SRPK3Q9UPE1 567 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 A0A0B4J2A0 478 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 LOC101059948A0A1B0GTJ6 334 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 DBX1A6NMT0 343 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 TEX46H3BTG2 121 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 SULT2B1O00204 365 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 DCNP07585 359 aaKnown RBP11.64□□□□□ -0.55
USB1-207ENST00000563149 CX3CR1P49238 355 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 ATP1B3P54709 279 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 CFHR1Q03591 330 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 EIF3IQ13347 325 aaKnown RBP11.64□□□□□ -0.55
USB1-207ENST00000563149 INPP5JQ15735 1006 aaPredicted RBP11.64□□□□□ -0.55
USB1-207ENST00000563149 C1orf189Q5VU69 101 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 PGAP1Q75T13 922 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 HOGA1Q86XE5 327 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 OR5T2Q8NGG2 359 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 OR52H1Q8NGJ2 320 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 FBXW5Q969U6 566 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 SEC22AQ96IW7 307 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 MRGPRX4Q96LA9 322 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 MRPL13Q9BYD1 178 aaKnown RBP11.64□□□□□ -0.55
USB1-207ENST00000563149 NMES1Q9C002 83 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 WDR13Q9H1Z4 485 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 SERINC1Q9NRX5 453 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 MED29Q9NX70 200 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 SHPKQ9UHJ6 478 aa11.64□□□□□ -0.55
USB1-207ENST00000563149 IGLV3-12A0A075B6K2 115 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 ZNF878C9JN71 531 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 CCSO14618 274 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 PIAS2O75928 621 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 APOC3P02656 99 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 FOSL2P15408 326 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 ZNF20P17024 532 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 HRH1P35367 487 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 ZNF93P35789 620 aaPredicted RBP11.63□□□□□ -0.55
USB1-207ENST00000563149 CASRP41180 1078 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 BIDP55957 195 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 PPIAP62937 165 aaKnown RBP11.63□□□□□ -0.55
USB1-207ENST00000563149 SQSTM1Q13501 440 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 PNLIPRP3Q17RR3 467 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 VAX1Q5SQQ9 334 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 AWAT2Q6E213 333 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 ANGPTL5Q86XS5 388 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 ARRDC1Q8N5I2 433 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 DEFB119Q8N690 84 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 GVQW1Q8N7I0 195 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 APCDD1LQ8NCL9 501 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 NFAM1Q8NET5 270 aaPredicted RBP11.63□□□□□ -0.55
USB1-207ENST00000563149 STOML3Q8TAV4 291 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 MARC2Q969Z3 335 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 SCGB3A2Q96PL1 93 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 MS4A7Q9GZW8 240 aaPredicted RBP11.63□□□□□ -0.55
USB1-207ENST00000563149 SDHAF3Q9NRP4 125 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 PCDH15Q96QU1 1955 aa11.63□□□□□ -0.55
USB1-207ENST00000563149 PCNX3Q9H6A9 2034 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 TRBV6-7A0A0A0MS04 114 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 CEACAM18A8MTB9 384 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 NUDT19A8MXV4 375 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 F8VVB4 439 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 F8VWA3 439 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 TSPAN9O75954 239 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 CRHP06850 196 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 GLB1P16278 677 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 PSMB6P28072 239 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 CBX5P45973 191 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 LBX1P52954 281 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 EMP2P54851 167 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 FBXW4P57775 412 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 FOXK1P85037 733 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 NAAAQ02083 359 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 FOXF1Q12946 379 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 HYAL4Q2M3T9 481 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 CCDC157Q569K6 752 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 RHBDD2Q6NTF9 364 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 WDR74Q6RFH5 385 aaPredicted RBP11.62□□□□□ -0.55
USB1-207ENST00000563149 COX15Q7KZN9 410 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 RABEPKQ7Z6M1 372 aa11.62□□□□□ -0.55
USB1-207ENST00000563149 ANKRD37Q7Z713 158 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms