RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 SEMA4FO95754 770 aa12.46□□□□□ -0.41
VPS9D1-202ENST00000561976 FOSL1P15407 271 aa12.46□□□□□ -0.41
VPS9D1-202ENST00000561976 CBX5P45973 191 aa12.46□□□□□ -0.41
VPS9D1-202ENST00000561976 CX3CR1P49238 355 aa12.46□□□□□ -0.41
VPS9D1-202ENST00000561976 SGCAQ16586 387 aa12.46□□□□□ -0.41
VPS9D1-202ENST00000561976 TMEM92Q6UXU6 159 aa12.46□□□□□ -0.41
VPS9D1-202ENST00000561976 SLC26A10Q8NG04 563 aa12.46□□□□□ -0.41
VPS9D1-202ENST00000561976 OR1M1Q8NGA1 313 aa12.46□□□□□ -0.41
VPS9D1-202ENST00000561976 OR13C9Q8NGT0 318 aa12.46□□□□□ -0.41
VPS9D1-202ENST00000561976 NMES1Q9C002 83 aa12.46□□□□□ -0.41
VPS9D1-202ENST00000561976 TMEM100Q9NV29 134 aa12.46□□□□□ -0.41
VPS9D1-202ENST00000561976 UQCC1Q9NVA1 299 aa12.46□□□□□ -0.41
VPS9D1-202ENST00000561976 TCRBV21S2A2A0A5A6 115 aa12.46□□□□□ -0.42
VPS9D1-202ENST00000561976 SYT7O43581 403 aa12.46□□□□□ -0.42
VPS9D1-202ENST00000561976 THEGLP0DJG4 465 aa12.46□□□□□ -0.42
VPS9D1-202ENST00000561976 IL11P20809 199 aa12.46□□□□□ -0.42
VPS9D1-202ENST00000561976 HSD11B1P28845 292 aa12.46□□□□□ -0.42
VPS9D1-202ENST00000561976 CTHP32929 405 aa12.46□□□□□ -0.42
VPS9D1-202ENST00000561976 B2MP61769 119 aa12.46□□□□□ -0.42
VPS9D1-202ENST00000561976 NAAAQ02083 359 aa12.46□□□□□ -0.42
VPS9D1-202ENST00000561976 DNM1P34Q6PK57 102 aa12.46□□□□□ -0.42
VPS9D1-202ENST00000561976 LYPD6Q86Y78 171 aa12.46□□□□□ -0.42
VPS9D1-202ENST00000561976 ZFP82Q8N141 532 aa12.46□□□□□ -0.42
VPS9D1-202ENST00000561976 DTWD2Q8NBA8 298 aa12.46□□□□□ -0.42
VPS9D1-202ENST00000561976 ST7LQ8TDW4 575 aa12.46□□□□□ -0.42
VPS9D1-202ENST00000561976 USB1Q9BQ65 265 aaKnown RBP12.46□□□□□ -0.42
VPS9D1-202ENST00000561976 IFT22Q9H7X7 185 aa12.46□□□□□ -0.42
VPS9D1-202ENST00000561976 ZFP57Q9NU63 452 aa12.46□□□□□ -0.42
VPS9D1-202ENST00000561976 DZANK1Q9NVP4 752 aa12.46□□□□□ -0.42
VPS9D1-202ENST00000561976 PRR13Q9NZ81 148 aa12.46□□□□□ -0.42
VPS9D1-202ENST00000561976 LHX6Q9UPM6 363 aa12.46□□□□□ -0.42
VPS9D1-202ENST00000561976 FAM96BQ9Y3D0 163 aa12.46□□□□□ -0.42
VPS9D1-202ENST00000561976 RHBDD3Q9Y3P4 386 aa12.46□□□□□ -0.42
VPS9D1-202ENST00000561976 DBX1A6NMT0 343 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 NUDT19A8MXV4 375 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 NPIPA5E9PKD4 350 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 PRAMEF26H0Y7S4 382 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 ADAP1O75689 374 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 BPNT1O95861 308 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 NPY4RP50391 375 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 EMP2P54851 167 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 PDZK1IP1Q13113 114 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 FAM109BQ6ICB4 259 aaPredicted RBP12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 KLHL24Q6TFL4 600 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 TTLL10Q6ZVT0 673 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 PGAP1Q75T13 922 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 ANGPTL5Q86XS5 388 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 OR2I1PQ8NGU4 316 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 ADAT3Q96EY9 351 aaPredicted RBP12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 CDC6Q99741 560 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 CMSS1Q9BQ75 279 aaKnown RBP12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 CYTL1Q9NRR1 136 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 LANCL2Q9NS86 450 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 NPIPA1Q9UND3 350 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 ALG1L2C9J202 215 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 H0YIZ8 118 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 SSX5O60225 188 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 SPP1P10451 314 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 NFYBP25208 207 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 PJVKQ0ZLH3 352 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 MICBQ29980 383 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 ZNF528Q3MIS6 628 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 TMEM128Q5BJH2 165 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 C10orf91Q5T1B1 145 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 AVPI1Q5T686 147 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 COL13A1Q5TAT6 717 aaPredicted RBP12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 HOGA1Q86XE5 327 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 PRSS58Q8IYP2 241 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 TERB2Q8NHR7 220 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 ZNF721Q8TF20 911 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 TGM7Q96PF1 710 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 SPACA5Q96QH8 159 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 NICN1Q9BSH3 213 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 SEC11CQ9BY50 192 aa12.45□□□□□ -0.42
VPS9D1-202ENST00000561976 SPTY2D1-AS1A0A0U1RR47 76 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 MSGN1A6NI15 193 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 H0YIG0 161 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 NPIPB7O75200 414 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 SCGNO76038 276 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 CRYBA1P05813 215 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 PI3P19957 117 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 TBPP20226 339 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 DCDP81605 110 aaKnown RBP12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 FZD2Q14332 565 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 PNLIPRP3Q17RR3 467 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 PTCRAQ6ISU1 281 aaPredicted RBP12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 IL34Q6ZMJ4 242 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 TMEM200AQ86VY9 491 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 FAM219AQ8IW50 185 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 LINC00469Q8N7U9 141 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 OR5D14Q8NGL3 314 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 GPR119Q8TDV5 335 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 TMEM41AQ96HV5 264 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 FOXQ1Q9C009 403 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 METTL8Q9H825 291 aaKnown RBP12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 WBP1LQ9NX94 342 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 REV3LO60673 3130 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 TRBV6-7A0A0A0MS04 114 aa12.44□□□□□ -0.42
VPS9D1-202ENST00000561976 LINC01565O15544 149 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms