RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 SMG1Q96Q15 3661 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 TRBV5-5A0A0J9YX44 114 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 TMEM269A0A1B0GVZ9 245 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 TTRP02766 147 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 CRYGSP22914 178 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 IGHV1-2P23083 117 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 CTSSP25774 331 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 CAV3P56539 151 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 PSMA6P60900 246 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 KLRB1Q12918 225 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 CARTPTQ16568 116 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 NRN1LQ496H8 165 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 ELFN2Q5R3F8 820 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 GFRALQ6UXV0 394 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 SLC16A14Q7RTX9 510 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 HAVCR2Q8TDQ0 301 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 KCTD7Q96MP8 289 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 COQ7Q99807 217 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 ATF6BQ99941 703 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 SOX7Q9BT81 388 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 OR2H1Q9GZK4 316 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 BRD7Q9NPI1 651 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 TINAGQ9UJW2 476 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 OR52A1Q9UKL2 312 aa12.49□□□□□ -0.41
RABGGTA-209ENST00000559551 ACOD1A6NK06 481 aa12.48□□□□□ -0.41
RABGGTA-209ENST00000559551 HLA-HP01893 362 aa12.48□□□□□ -0.41
RABGGTA-209ENST00000559551 MPGP29372 298 aa12.48□□□□□ -0.41
RABGGTA-209ENST00000559551 SOX6P35712 828 aa12.48□□□□□ -0.41
RABGGTA-209ENST00000559551 TRAM1Q15629 374 aa12.48□□□□□ -0.41
RABGGTA-209ENST00000559551 KRTAP27-1Q3LI81 207 aa12.48□□□□□ -0.41
RABGGTA-209ENST00000559551 SPANXN2Q5MJ10 180 aa12.48□□□□□ -0.41
RABGGTA-209ENST00000559551 SFRP5Q5T4F7 317 aa12.48□□□□□ -0.41
RABGGTA-209ENST00000559551 ASPHD2Q6ICH7 369 aa12.48□□□□□ -0.41
RABGGTA-209ENST00000559551 OR2A2Q6IF42 318 aa12.48□□□□□ -0.41
RABGGTA-209ENST00000559551 GDPD3Q7L5L3 318 aa12.48□□□□□ -0.41
RABGGTA-209ENST00000559551 SYT9Q86SS6 491 aa12.48□□□□□ -0.41
RABGGTA-209ENST00000559551 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-209ENST00000559551 OR1K1Q8NGR3 316 aa12.48□□□□□ -0.41
RABGGTA-209ENST00000559551 OR6K3Q8NGY3 331 aa12.48□□□□□ -0.41
RABGGTA-209ENST00000559551 BCL2L2Q92843 193 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-209ENST00000559551 GTF2A1LQ9UNN4 478 aa12.48□□□□□ -0.41
RABGGTA-209ENST00000559551 ZFYVE26Q68DK2 2539 aa12.48□□□□□ -0.41
RABGGTA-209ENST00000559551 OR6C6A6NF89 314 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 FIGNL2A6NMB9 653 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 TMEM212A6NML5 194 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 SGCEO43556 437 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 UCHL1P09936 223 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 GLI4P10075 376 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 CEACAM8P31997 349 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 ZNF121P58317 390 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 ARPC4P59998 168 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 GALK2Q01415 458 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 TSC22D1Q15714 1073 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 HIKESHIQ53FT3 197 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 YIF1BQ5BJH7 314 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 CPEB3Q8NE35 698 aaKnown RBP12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 SETD6Q8TBK2 473 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 DERL3Q96Q80 235 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 KCNJ15Q99712 375 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 PLSCR4Q9NRQ2 329 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 SNTG1Q9NSN8 517 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 PLEK2Q9NYT0 353 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 IGSF10Q6WRI0 2623 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 ANKRD61A6NGH8 418 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 ZNF879B4DU55 563 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 LMX1BO60663 402 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 SLC19A2O60779 497 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 NCR1O76036 304 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 PTGER4P35408 488 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 TIMP3P35625 211 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 CX3CR1P49238 355 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 RAB35Q15286 201 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 GABRG1Q8N1C3 465 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 ZNF676Q8N7Q3 588 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 OR8B12Q8NGG6 310 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 OR6F1Q8NGZ6 308 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 MED18Q9BUE0 208 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 PBOV1Q9GZY1 135 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 OPN3Q9H1Y3 402 aaPredicted RBP12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 NOX4Q9NPH5 578 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 GSTK1Q9Y2Q3 226 aa12.47□□□□□ -0.41
RABGGTA-209ENST00000559551 RELNP78509 3460 aa12.46□□□□□ -0.41
RABGGTA-209ENST00000559551 IL1AP01583 271 aa12.46□□□□□ -0.41
RABGGTA-209ENST00000559551 ACSM4P0C7M7 580 aa12.46□□□□□ -0.41
RABGGTA-209ENST00000559551 TMIGD3P0DMS9 266 aaPredicted RBP12.46□□□□□ -0.41
RABGGTA-209ENST00000559551 SOX2P48431 317 aa12.46□□□□□ -0.41
RABGGTA-209ENST00000559551 SCRN3Q0VDG4 424 aa12.46□□□□□ -0.41
RABGGTA-209ENST00000559551 PABPC1L2AQ5JQF8 200 aa12.46□□□□□ -0.41
RABGGTA-209ENST00000559551 ATAD3CQ5T2N8 411 aa12.46□□□□□ -0.41
RABGGTA-209ENST00000559551 Q6ZT83 130 aa12.46□□□□□ -0.41
RABGGTA-209ENST00000559551 ELMOD2Q8IZ81 293 aa12.46□□□□□ -0.41
RABGGTA-209ENST00000559551 ASCC1Q8N9N2 400 aaKnown RBP12.46□□□□□ -0.41
RABGGTA-209ENST00000559551 ZNF610Q8N9Z0 462 aa12.46□□□□□ -0.41
RABGGTA-209ENST00000559551 OR1F12Q8NHA8 337 aa12.46□□□□□ -0.41
RABGGTA-209ENST00000559551 ZNF75AQ96N20 296 aa12.46□□□□□ -0.41
RABGGTA-209ENST00000559551 GFI1Q99684 422 aa12.46□□□□□ -0.41
RABGGTA-209ENST00000559551 SLC17A5Q9NRA2 495 aa12.46□□□□□ -0.41
RABGGTA-209ENST00000559551 PLEKHB1Q9UF11 243 aaPredicted RBP12.46□□□□□ -0.41
RABGGTA-209ENST00000559551 NUFIP1Q9UHK0 495 aaKnown RBP12.46□□□□□ -0.41
RABGGTA-209ENST00000559551 TIMM10BQ9Y5J6 103 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms