RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 CD55P08174 381 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 H2BFMP0C1H6 154 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 ACSM4P0C7M7 580 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 LYNX1P0DP58 116 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 CLUP10909 449 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 IRF2P14316 349 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 CFL1P23528 166 aaKnown RBP3.72□□□□□ -1.81
SNX1-205ENST00000559339 IGFBP5P24593 272 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 COL8A2P25067 703 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 GSTT1P30711 240 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 RPS27P42677 84 aaKnown RBP3.72□□□□□ -1.81
SNX1-205ENST00000559339 SRP9P49458 86 aaKnown RBP3.72□□□□□ -1.81
SNX1-205ENST00000559339 CRISP1P54107 249 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 ACTR3P61158 418 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 HIST1H3AP68431 136 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 CDK5Q00535 292 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 MVKQ03426 396 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 MZT1Q08AG7 82 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 SCGB2A2Q13296 93 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 CCNIQ14094 377 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 EIF2B1Q14232 305 aaKnown RBP3.72□□□□□ -1.81
SNX1-205ENST00000559339 GK2Q14410 553 aaPredicted RBP3.72□□□□□ -1.81
SNX1-205ENST00000559339 HLXQ14774 488 aaPredicted RBP3.72□□□□□ -1.81
SNX1-205ENST00000559339 SNCBQ16143 134 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 SNAPC1Q16533 368 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 PCK2Q16822 640 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 KRTAP21-3Q3LHN1 58 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 HIST2H3PS2Q5TEC6 136 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 LCN1P1Q5VSP4 162 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 OR2T2Q6IF00 324 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 ACSM5Q6NUN0 579 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 ZFP1Q6P2D0 407 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 PLBD1Q6P4A8 553 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 KCTD18Q6PI47 426 aaPredicted RBP3.72□□□□□ -1.81
SNX1-205ENST00000559339 COLCA1Q6ZS62 124 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 HIST2H3AQ71DI3 136 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 ASRGL1Q7L266 308 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 DPY19L4Q7Z388 723 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 TMEM179BQ7Z7N9 219 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 HS3ST5Q8IZT8 346 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 C1orf87Q8N0U7 546 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 OR5AS1Q8N127 324 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 KLHL36Q8N4N3 616 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 TEX29Q8N6K0 151 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 IQCF1Q8N6M8 205 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 ZNF283Q8N7M2 679 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 LINC01356Q8N9X3 169 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 BHLHE23Q8NDY6 225 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 OR8G5Q8NG78 346 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 OR52H1Q8NGJ2 320 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 THEM6Q8WUY1 208 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 SLCO4A1Q96BD0 722 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 MSI2Q96DH6 328 aaKnown RBP3.72□□□□□ -1.81
SNX1-205ENST00000559339 SLAMF6Q96DU3 332 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 DUS3LQ96G46 650 aaKnown RBP3.72□□□□□ -1.81
SNX1-205ENST00000559339 CENPNQ96H22 339 aaPredicted RBP3.72□□□□□ -1.81
SNX1-205ENST00000559339 MAP6Q96JE9 813 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 RAB3IPQ96QF0 476 aaPredicted RBP3.72□□□□□ -1.81
SNX1-205ENST00000559339 DDOQ99489 341 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 KCNJ15Q99712 375 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 GAL3ST1Q99999 423 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 RBM4BQ9BQ04 359 aaKnown RBP3.72□□□□□ -1.81
SNX1-205ENST00000559339 MROQ9BYG7 248 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 NMNAT2Q9BZQ4 307 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 NARFLQ9H6Q4 476 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 WDR76Q9H967 626 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 PNRC2Q9NPJ4 139 aaKnown RBP3.72□□□□□ -1.81
SNX1-205ENST00000559339 MRPL22Q9NWU5 206 aaKnown RBP3.72□□□□□ -1.81
SNX1-205ENST00000559339 TMEM160Q9NX00 188 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 TVP23BQ9NYZ1 205 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 PTTG3PQ9NZH4 202 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 LAMP5Q9UJQ1 280 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 PCDHB10Q9UN67 800 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 PPP1R3CQ9UQK1 317 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 N6AMT1Q9Y5N5 214 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 TMEM14AQ9Y6G1 99 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 RTTNQ86VV8 2226 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 NIPBLQ6KC79 2804 aaeCLIP3.72□□□□□ -1.81
SNX1-205ENST00000559339 ABCA2Q9BZC7 2435 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 ARFGEF3Q5TH69 2177 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 JMJD1CQ15652 2540 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 NAV3Q8IVL0 2385 aa3.71□□□□□ -1.81
SNX1-205ENST00000559339 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.71□□□□□ -1.82
SNX1-205ENST00000559339 SLC22A31A6NKX4 558 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 SNTNA6NMZ2 147 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 ANKRD30BLA7E2S9 258 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 POM121CA8CG34 1229 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 IQCF6A8MYZ5 107 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 TBX1O43435 398 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 GMDSO60547 372 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 RP2O75695 350 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 ANXA2P07355 339 aaKnown RBP3.71□□□□□ -1.82
SNX1-205ENST00000559339 MSMBP08118 114 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 FAM157CP0CG43 387 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 ZNF16P17020 682 aaPredicted RBP3.71□□□□□ -1.82
SNX1-205ENST00000559339 HOXB4P17483 251 aaPredicted RBP3.71□□□□□ -1.82
SNX1-205ENST00000559339 SRD5A1P18405 259 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 OTX1P32242 354 aaPredicted RBP3.71□□□□□ -1.82
SNX1-205ENST00000559339 ATP6V1E1P36543 226 aa3.71□□□□□ -1.82
SNX1-205ENST00000559339 DDOSTP39656 456 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms