RNA–Protein interactions for RNA: ENST00000557958.1

LDLR-206, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 1,881 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-206ENST00000557958 CRLF2Q9HC73 371 aa14.83□□□□□ -0.04
LDLR-206ENST00000557958 MED12Q93074 2177 aa14.83□□□□□ -0.04
LDLR-206ENST00000557958 CNTRLQ7Z7A1 2325 aa14.83□□□□□ -0.04
LDLR-206ENST00000557958 CCNKO75909 580 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 CST2P09228 141 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 GNALP38405 381 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 HIST1H3AP68431 136 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 ECH1Q13011 328 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 HIST2H3PS2Q5TEC6 136 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 HIST2H3AQ71DI3 136 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 KRT74Q7RTS7 529 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 ABHD12BQ7Z5M8 362 aaPredicted RBP14.82□□□□□ -0.04
LDLR-206ENST00000557958 LRRC18Q8N456 261 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 PLPP7Q8NBV4 271 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 DUSP18Q8NEJ0 188 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 SPTSSAQ969W0 71 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 FAM3DQ96BQ1 224 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 ZNF775Q96BV0 537 aaPredicted RBP14.82□□□□□ -0.04
LDLR-206ENST00000557958 ZNF845Q96IR2 970 aaPredicted RBP14.82□□□□□ -0.04
LDLR-206ENST00000557958 NEK6Q9HC98 313 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 DIABLOQ9NR28 239 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 ZNF221Q9UK13 617 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 NOSIPQ9Y314 301 aaKnown RBP14.82□□□□□ -0.04
LDLR-206ENST00000557958 NCKAP5O14513 1909 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 MRPL33O75394 65 aaKnown RBP14.82□□□□□ -0.04
LDLR-206ENST00000557958 KRT33AO76009 404 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 ITGA5P08648 1049 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 HTR2CP28335 458 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 AP3S2P59780 193 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 PCBD1P61457 104 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 GALK2Q01415 458 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 SCRN3Q0VDG4 424 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 RSBN1Q5VWQ0 802 aaPredicted RBP14.82□□□□□ -0.04
LDLR-206ENST00000557958 DOK3Q7L591 496 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 ZADH2Q8N4Q0 377 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 OR51E1Q8TCB6 317 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 ABHD3Q8WU67 409 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 YIPF5Q969M3 257 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 FGGYQ96C11 551 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 SORCS2Q96PQ0 1159 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 PRRG4Q9BZD6 226 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 RNF121Q9H920 327 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 TMEM38BQ9NVV0 291 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 PLEK2Q9NYT0 353 aa14.82□□□□□ -0.04
LDLR-206ENST00000557958 GABARAPH6UMI1 98 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 TFECO14948 347 aaPredicted RBP14.81□□□□□ -0.04
LDLR-206ENST00000557958 CEACAM4O75871 244 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 CD37P11049 281 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 BDKRB2P30411 391 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 POU3F4P49335 361 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 PMP22Q01453 160 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 IFITM2Q01629 132 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 RAB35Q15286 201 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 CARTPTQ16568 116 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 NRN1LQ496H8 165 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 PGAP1Q75T13 922 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 UBE2J2Q8N2K1 259 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 JAGN1Q8N5M9 183 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 CCDC54Q8NEL0 328 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 OR51D1Q8NGF3 324 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 OR8B12Q8NGG6 310 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 OR6F1Q8NGZ6 308 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 PGAM5Q96HS1 289 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 ALKBH3Q96Q83 286 aaPredicted RBP14.81□□□□□ -0.04
LDLR-206ENST00000557958 DEFB127Q9H1M4 99 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 LDAHQ9H6V9 325 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 EXO5Q9H790 373 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 PLEKHA1Q9HB21 404 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 TMEM138Q9NPI0 162 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 SLC5A6Q9Y289 635 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 CACNG2Q9Y698 323 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 FRYQ5TBA9 3013 aa14.81□□□□□ -0.04
LDLR-206ENST00000557958 C1QTNF9BB2RNN3 333 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 DOK2O60496 412 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 FARS2O95363 451 aaKnown RBP14.8□□□□□ -0.04
LDLR-206ENST00000557958 ECDO95905 644 aaPredicted RBP14.8□□□□□ -0.04
LDLR-206ENST00000557958 C1QTNF9P0C862 333 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 RAB3AP20336 220 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 CDK2P24941 298 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 KIR2DL3P43628 341 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 SLC6A9P48067 706 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 DGCR2P98153 550 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 RNPS1Q15287 305 aaKnown RBP14.8□□□□□ -0.04
LDLR-206ENST00000557958 STK11Q15831 433 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 GLYATL3Q5SZD4 288 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 ASPHD2Q6ICH7 369 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 FAM166AQ6J272 317 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 ANKRD16Q6P6B7 361 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 FAM57BQ71RH2 274 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 FCAMRQ8WWV6 532 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 FOXB1Q99853 325 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 LINC00470Q9BZP3 86 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 RNF122Q9H9V4 155 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 N6AMT1Q9Y5N5 214 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 LOC390937A0A1W2PQ73 354 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 XRCC3O43542 346 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 SGCEO43556 437 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 ARSBP15848 533 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 CCL1P22362 96 aa14.8□□□□□ -0.04
LDLR-206ENST00000557958 DDOSTP39656 456 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms