RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 DOPEY2Q9Y3R5 2298 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 F5H5K5 113 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 HOXC12P31275 282 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 TGFBR1P36897 503 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 TPTEP56180 551 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 UBE2NP61088 152 aaKnown RBP20.68■□□□□ 0.9
SIX4-203ENST00000556952 RAB1AP62820 205 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 TUBA1BP68363 451 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 GSG1Q2KHT4 349 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 DRAM2Q6UX65 266 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 TUBA1AQ71U36 451 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 CXorf67Q86X51 503 aaPredicted RBP20.68■□□□□ 0.9
SIX4-203ENST00000556952 ELMOD2Q8IZ81 293 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 OR13C5Q8NGS8 318 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 GPR148Q8TDV2 347 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 RND1Q92730 232 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 CCDC120Q96HB5 630 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 SLC17A5Q9NRA2 495 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 B3GNT2Q9NY97 397 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 ZNF503-AS2A6NEH8 195 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 MAPK3P27361 379 aaPredicted RBP20.68■□□□□ 0.9
SIX4-203ENST00000556952 RSPO1Q2MKA7 263 aaPredicted RBP20.68■□□□□ 0.9
SIX4-203ENST00000556952 SFRP5Q5T4F7 317 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 TMEM244Q5VVB8 128 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 CEACAM19Q7Z692 300 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 MRGPRGQ86SM5 289 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 DCUN1D5Q9BTE7 237 aa20.68■□□□□ 0.9
SIX4-203ENST00000556952 TRBV5-5A0A0J9YX44 114 aa20.67■□□□□ 0.9
SIX4-203ENST00000556952 DVL2O14641 736 aa20.67■□□□□ 0.9
SIX4-203ENST00000556952 ANXA2P07355 339 aaKnown RBP20.67■□□□□ 0.9
SIX4-203ENST00000556952 BMP5P22003 454 aa20.67■□□□□ 0.9
SIX4-203ENST00000556952 ACHEP22303 614 aa20.67■□□□□ 0.9
SIX4-203ENST00000556952 PCSK6P29122 969 aa20.67■□□□□ 0.9
SIX4-203ENST00000556952 SERPINB10P48595 397 aa20.67■□□□□ 0.9
SIX4-203ENST00000556952 PLP2Q04941 152 aa20.67■□□□□ 0.9
SIX4-203ENST00000556952 INSL4Q14641 139 aa20.67■□□□□ 0.9
SIX4-203ENST00000556952 Q499Y3 187 aa20.67■□□□□ 0.9
SIX4-203ENST00000556952 ZMAT1Q5H9K5 638 aa20.67■□□□□ 0.9
SIX4-203ENST00000556952 ZNF474Q6S9Z5 364 aaPredicted RBP20.67■□□□□ 0.9
SIX4-203ENST00000556952 UNQ9370/PRO34162Q6UXP9 181 aa20.67■□□□□ 0.9
SIX4-203ENST00000556952 PRSS45Q7RTY3 260 aa20.67■□□□□ 0.9
SIX4-203ENST00000556952 SP140LQ9H930 580 aa20.67■□□□□ 0.9
SIX4-203ENST00000556952 OBP2BQ9NPH6 170 aa20.67■□□□□ 0.9
SIX4-203ENST00000556952 BRD7Q9NPI1 651 aa20.67■□□□□ 0.9
SIX4-203ENST00000556952 SPTAN1Q13813 2472 aaKnown RBP20.66■□□□□ 0.9
SIX4-203ENST00000556952 ZNF879B4DU55 563 aa20.66■□□□□ 0.9
SIX4-203ENST00000556952 ZG16O60844 167 aa20.66■□□□□ 0.9
SIX4-203ENST00000556952 ARL6IP5O75915 188 aa20.66■□□□□ 0.9
SIX4-203ENST00000556952 TTRP02766 147 aa20.66■□□□□ 0.9
SIX4-203ENST00000556952 SLC6A9P48067 706 aa20.66■□□□□ 0.9
SIX4-203ENST00000556952 ADORA2A-AS1P86434 159 aa20.66■□□□□ 0.9
SIX4-203ENST00000556952 CPEB3Q8NE35 698 aaKnown RBP20.66■□□□□ 0.9
SIX4-203ENST00000556952 DYNC2LI1Q8TCX1 351 aa20.66■□□□□ 0.9
SIX4-203ENST00000556952 SLC7A6Q92536 515 aa20.66■□□□□ 0.9
SIX4-203ENST00000556952 OR14A2Q96R54 314 aa20.66■□□□□ 0.9
SIX4-203ENST00000556952 NOX3Q9HBY0 568 aa20.66■□□□□ 0.9
SIX4-203ENST00000556952 IQCMA0A1B0GVH7 501 aa20.65■□□□□ 0.9
SIX4-203ENST00000556952 A8MXE2 369 aa20.65■□□□□ 0.9
SIX4-203ENST00000556952 DBHP09172 617 aa20.65■□□□□ 0.9
SIX4-203ENST00000556952 ACSM4P0C7M7 580 aa20.65■□□□□ 0.9
SIX4-203ENST00000556952 OCM2P0CE71 109 aa20.65■□□□□ 0.9
SIX4-203ENST00000556952 ZNF182P17025 639 aaPredicted RBP20.65■□□□□ 0.9
SIX4-203ENST00000556952 ODF4Q2M2E3 257 aa20.65■□□□□ 0.9
SIX4-203ENST00000556952 BHLHA15Q7RTS1 189 aaPredicted RBP20.65■□□□□ 0.9
SIX4-203ENST00000556952 LUZP2Q86TE4 346 aa20.65■□□□□ 0.9
SIX4-203ENST00000556952 OR8B12Q8NGG6 310 aa20.65■□□□□ 0.9
SIX4-203ENST00000556952 PPP1R14AQ96A00 147 aa20.65■□□□□ 0.9
SIX4-203ENST00000556952 MED18Q9BUE0 208 aa20.65■□□□□ 0.9
SIX4-203ENST00000556952 HHLA2Q9UM44 414 aa20.65■□□□□ 0.9
SIX4-203ENST00000556952 EEF1E1-BLOC1S5C9J1V9 151 aa20.64■□□□□ 0.9
SIX4-203ENST00000556952 USP9YO00507 2555 aaPredicted RBP20.64■□□□□ 0.9
SIX4-203ENST00000556952 EEF1E1O43324 174 aaKnown RBP20.64■□□□□ 0.9
SIX4-203ENST00000556952 IL1AP01583 271 aa20.64■□□□□ 0.9
SIX4-203ENST00000556952 UCHL1P09936 223 aa20.64■□□□□ 0.9
SIX4-203ENST00000556952 SLC2A1P11166 492 aa20.64■□□□□ 0.9
SIX4-203ENST00000556952 PSMB1P20618 241 aaKnown RBP20.64■□□□□ 0.9
SIX4-203ENST00000556952 SPTBN1Q01082 2364 aaKnown RBP20.64■□□□□ 0.9
SIX4-203ENST00000556952 FAM57BQ71RH2 274 aa20.64■□□□□ 0.9
SIX4-203ENST00000556952 MDP1Q86V88 176 aa20.64■□□□□ 0.9
SIX4-203ENST00000556952 RDH10Q8IZV5 341 aa20.64■□□□□ 0.9
SIX4-203ENST00000556952 OR52H1Q8NGJ2 320 aa20.64■□□□□ 0.9
SIX4-203ENST00000556952 SSC4DQ8WTU2 575 aa20.64■□□□□ 0.9
SIX4-203ENST00000556952 PGAM5Q96HS1 289 aa20.64■□□□□ 0.9
SIX4-203ENST00000556952 DERL3Q96Q80 235 aa20.64■□□□□ 0.9
SIX4-203ENST00000556952 LOC107986453A0A1B0GWG9 222 aa20.63■□□□□ 0.89
SIX4-203ENST00000556952 WIPF3A6NGB9 483 aa20.63■□□□□ 0.89
SIX4-203ENST00000556952 MYL9P24844 172 aa20.63■□□□□ 0.89
SIX4-203ENST00000556952 STOMP27105 288 aa20.63■□□□□ 0.89
SIX4-203ENST00000556952 CALRP27797 417 aaKnown RBP20.63■□□□□ 0.89
SIX4-203ENST00000556952 C1QTNF12Q5T7M4 302 aa20.63■□□□□ 0.89
SIX4-203ENST00000556952 TSEN15Q8WW01 171 aaKnown RBP20.63■□□□□ 0.89
SIX4-203ENST00000556952 SLC24A3Q9HC58 644 aa20.63■□□□□ 0.89
SIX4-203ENST00000556952 JKAMPQ9P055 326 aa20.63■□□□□ 0.89
SIX4-203ENST00000556952 AMDHD2Q9Y303 409 aa20.63■□□□□ 0.89
SIX4-203ENST00000556952 PTPN13Q12923 2485 aa20.63■□□□□ 0.89
SIX4-203ENST00000556952 A0A0U1RQV5 110 aa20.63■□□□□ 0.89
SIX4-203ENST00000556952 RAF1P04049 648 aa20.63■□□□□ 0.89
SIX4-203ENST00000556952 IL32P24001 234 aa20.63■□□□□ 0.89
SIX4-203ENST00000556952 APEX1P27695 318 aaKnown RBP20.63■□□□□ 0.89
SIX4-203ENST00000556952 MTNR1BP49286 362 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms