RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 LHFPL2Q6ZUX7 228 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 SIRT6Q8N6T7 355 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 OR4C16Q8NGL9 310 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 NUDCD2Q8WVJ2 157 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 PLA2G12AQ9BZM1 189 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 SIRT5Q9NXA8 310 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 DSCR3O14972 297 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 ICOSLGO75144 302 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 GLAP06280 429 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 RRADP55042 308 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 EDDM3AQ14507 147 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 PCK2Q16822 640 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 NT5CQ8TCD5 201 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 C2orf50Q96LR7 162 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 SLCO1B1Q9Y6L6 691 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 ARL2-SNX15V9GYD0 113 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 NME1P15531 152 aaKnown RBP12.66□□□□□ -0.38
VTI1B-204ENST00000554659 HRH1P35367 487 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 EMDP50402 254 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 ENDOGQ14249 297 aaKnown RBP12.66□□□□□ -0.38
VTI1B-204ENST00000554659 MLF2Q15773 248 aaPredicted RBP12.66□□□□□ -0.38
VTI1B-204ENST00000554659 GALNT16Q8N428 558 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 SIGLECL1Q8N7X8 197 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 KDF1Q8NAX2 398 aaPredicted RBP12.66□□□□□ -0.38
VTI1B-204ENST00000554659 TMPRSS5Q9H3S3 457 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 GPR84Q9NQS5 396 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 IL20Q9NYY1 176 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 DUSP13Q9UII6 198 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 RNF150Q9ULK6 438 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 TIMM10BQ9Y5J6 103 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 TOGARAM1Q9Y4F4 1720 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 H0Y8X5 98 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 CLLU1Q5K131 121 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 CORO6Q6QEF8 472 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 MSRB3Q8IXL7 192 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 TMEM229BQ8NBD8 167 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 APH1AQ96BI3 265 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 CLCF1Q9UBD9 225 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 COL16A1Q07092 1604 aaPredicted RBP12.65□□□□□ -0.38
VTI1B-204ENST00000554659 IGHV3-20A0A0C4DH32 117 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 POM121BA6NF01 834 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 TBX19O60806 448 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 DEFA4P12838 97 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 CYB561P49447 251 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 CDONQ4KMG0 1287 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 H2BFWTQ7Z2G1 175 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 OR4F5Q8NH21 305 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 OR51F2Q8NH61 342 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 RPUSD4Q96CM3 377 aaKnown RBP12.65□□□□□ -0.38
VTI1B-204ENST00000554659 MVB12AQ96EY5 273 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 FER1L6-AS2Q96M78 137 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 OR4F4Q96R69 305 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 CABLES2Q9BTV7 478 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 RTL8AQ9BWD3 113 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 CDCP1Q9H5V8 836 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 SLC22A13Q9Y226 551 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 BRWD1Q9NSI6 2320 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 CROCCQ5TZA2 2017 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 CTSLP07711 333 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 FAM74A1Q5RGS3 127 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 ZNF626Q68DY1 528 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 BTLAQ7Z6A9 289 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 RPS19BP1Q86WX3 136 aaKnown RBP12.65□□□□□ -0.38
VTI1B-204ENST00000554659 BATF2Q8N1L9 274 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 OR2AE1Q8NHA4 323 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 EDAQ92838 391 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 PBOV1Q9GZY1 135 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 ITGB4P16144 1822 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 SERTM1A2A2V5 107 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 M0R135 149 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 ST6GAL1P15907 406 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 HNF1AP20823 631 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 CLEC12BQ2HXU8 276 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 GLDNQ6ZMI3 551 aaPredicted RBP12.65□□□□□ -0.38
VTI1B-204ENST00000554659 ANGPTL6Q8NI99 470 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 GPX8Q8TED1 209 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 ZNF799Q96GE5 643 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 DERL3Q96Q80 235 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 NGBQ9NPG2 151 aa12.65□□□□□ -0.38
VTI1B-204ENST00000554659 KLRC4-KLRK1H3BQV0 150 aa12.65□□□□□ -0.39
VTI1B-204ENST00000554659 CHEK1O14757 476 aa12.65□□□□□ -0.39
VTI1B-204ENST00000554659 CDK5Q00535 292 aa12.65□□□□□ -0.39
VTI1B-204ENST00000554659 GPNMBQ14956 572 aa12.65□□□□□ -0.39
VTI1B-204ENST00000554659 LINC00303Q3SY05 128 aa12.65□□□□□ -0.39
VTI1B-204ENST00000554659 RNF212Q495C1 297 aa12.65□□□□□ -0.39
VTI1B-204ENST00000554659 LRRTM1Q86UE6 522 aa12.65□□□□□ -0.39
VTI1B-204ENST00000554659 BCL7CQ8WUZ0 217 aaPredicted RBP12.65□□□□□ -0.39
VTI1B-204ENST00000554659 PLAC1Q9HBJ0 212 aa12.65□□□□□ -0.39
VTI1B-204ENST00000554659 POMT2Q9UKY4 750 aa12.65□□□□□ -0.39
VTI1B-204ENST00000554659 SSC5DA1L4H1 1573 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 PHOX2AO14813 284 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 PNLIPRP2P54317 469 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 PARM1Q6UWI2 310 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 ANKRD33Q7Z3H0 272 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 ZNF485Q8NCK3 441 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 ZNRF4Q8WWF5 429 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 H1FXQ92522 213 aaKnown RBP12.64□□□□□ -0.39
VTI1B-204ENST00000554659 TEX101Q9BY14 249 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 SLCO1C1Q9NYB5 712 aa12.64□□□□□ -0.39
VTI1B-204ENST00000554659 WSB2Q9NYS7 404 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms