RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 COL6A6A6NMZ7 2263 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 BOD1L1Q8NFC6 3051 aa9.5□□□□□ -0.89
PABPN1-203ENST00000553960 PNMA8CA0A1B0GUJ8 204 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 SHISA3A0PJX4 238 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 IGKV3-15P01624 115 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 IGLV1-44P01699 117 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 ALDOBP05062 364 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 OCM2P0CE71 109 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 TMIGD3P0DMS9 266 aaPredicted RBP9.49□□□□□ -0.89
PABPN1-203ENST00000553960 GLI4P10075 376 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 B4GALT1P15291 398 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 ABOP16442 354 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 IGHV1-2P23083 117 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 MYL9P24844 172 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 HSD11B1P28845 292 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 ZNF121P58317 390 aaPredicted RBP9.49□□□□□ -0.89
PABPN1-203ENST00000553960 ZNF45Q02386 682 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 MFGE8Q08431 387 aaPredicted RBP9.49□□□□□ -0.89
PABPN1-203ENST00000553960 FAPQ12884 760 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 FBXL19-AS1Q494R0 122 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 BTLAQ7Z6A9 289 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 CD163Q86VB7 1156 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 CISD2Q8N5K1 135 aaKnown RBP9.49□□□□□ -0.89
PABPN1-203ENST00000553960 NKAIN3Q8N8D7 197 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 MCFD2Q8NI22 146 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 SSC4DQ8WTU2 575 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 PP6455Q8WZ26 134 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 TMEM106AQ96A25 262 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 ZNF775Q96BV0 537 aaPredicted RBP9.49□□□□□ -0.89
PABPN1-203ENST00000553960 FOXRED1Q96CU9 486 aaPredicted RBP9.49□□□□□ -0.89
PABPN1-203ENST00000553960 POM121Q96HA1 1249 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 POM121L2Q96KW2 1035 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 FOXN4Q96NZ1 517 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 TECTBQ96PL2 329 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 SH3GL3Q99963 347 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 SOSTQ9BQB4 213 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 AKIP1Q9NQ31 210 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 CENPMQ9NSP4 180 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 ELOVL5Q9NYP7 299 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 FBLN5Q9UBX5 448 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 SLC5A6Q9Y289 635 aa9.49□□□□□ -0.89
PABPN1-203ENST00000553960 LAMA5O15230 3695 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 LOC107986453A0A1B0GWG9 222 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 A8MXE2 369 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 AIPO00170 330 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 XRCC2O43543 280 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 DOK2O60496 412 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 MTRF1O75570 445 aaKnown RBP9.48□□□□□ -0.89
PABPN1-203ENST00000553960 RPP14O95059 124 aaKnown RBP9.48□□□□□ -0.89
PABPN1-203ENST00000553960 CDRT1O95170 752 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 EPXP11678 715 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 CBR1P16152 277 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 ZNF14P17017 642 aaPredicted RBP9.48□□□□□ -0.89
PABPN1-203ENST00000553960 RAB3BP20337 219 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 NR4A1P22736 598 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 CALRP27797 417 aaKnown RBP9.48□□□□□ -0.89
PABPN1-203ENST00000553960 CD40LGP29965 261 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 THBS2P35442 1172 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 DDOSTP39656 456 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 ALDH3B1P43353 468 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 CX3CR1P49238 355 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 PLP2Q04941 152 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 TAF13Q15543 124 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 OR8B8Q15620 311 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 TBRG1Q3YBR2 411 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 PABPC1L2AQ5JQF8 200 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 C1orf100Q5SVJ3 147 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 TMEM42Q69YG0 159 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 GFRALQ6UXV0 394 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 STAC2Q6ZMT1 411 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 PGAP1Q75T13 922 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 LRRTM1Q86UE6 522 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 CCDC190Q86UF4 302 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 SERPINA12Q8IW75 414 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 OR8B12Q8NGG6 310 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 OR5M9Q8NGP3 310 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 PTX4Q96A99 478 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 OR14A2Q96R54 314 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 KCNS3Q9BQ31 491 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 DCUN1D5Q9BTE7 237 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 SLITRK2Q9H156 845 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 CXorf56Q9H5V9 222 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 RNF167Q9H6Y7 350 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 HMG20AQ9NP66 347 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 NOX4Q9NPH5 578 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 ASF1BQ9NVP2 202 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 PRSS50Q9UI38 385 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 PROCRQ9UNN8 238 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 AMDHD2Q9Y303 409 aa9.48□□□□□ -0.89
PABPN1-203ENST00000553960 BSNQ9UPA5 3926 aa9.47□□□□□ -0.89
PABPN1-203ENST00000553960 IFITM5A6NNB3 132 aa9.47□□□□□ -0.89
PABPN1-203ENST00000553960 CLDN25C9JDP6 229 aa9.47□□□□□ -0.89
PABPN1-203ENST00000553960 PSMD9O00233 223 aa9.47□□□□□ -0.89
PABPN1-203ENST00000553960 CASKO14936 926 aa9.47□□□□□ -0.89
PABPN1-203ENST00000553960 DHRS3O75911 302 aa9.47□□□□□ -0.89
PABPN1-203ENST00000553960 ERCC1P07992 297 aaPredicted RBP9.47□□□□□ -0.89
PABPN1-203ENST00000553960 CALCBP10092 127 aa9.47□□□□□ -0.89
PABPN1-203ENST00000553960 CA7P43166 264 aa9.47□□□□□ -0.89
PABPN1-203ENST00000553960 BMXP51813 675 aa9.47□□□□□ -0.89
PABPN1-203ENST00000553960 LSM3P62310 102 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms