RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 FER1L6-AS2Q96M78 137 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 NPDC1Q9NQX5 325 aaPredicted RBP8.79□□□□□ -1
RAB5B-206ENST00000549505 SLC2A8Q9NY64 477 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 A0A0A6YYJ9 748 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 LOC105371267A0A1B0GV96 52 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 PINLYPA6NC86 204 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 FAM172BPA6NC97 362 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 FOXI3A8MTJ6 420 aaPredicted RBP8.79□□□□□ -1
RAB5B-206ENST00000549505 SNRPGP15A8MWD9 76 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 CA11O75493 328 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 MAS1P04201 325 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 RFPL3SP0C7P2 107 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 UBBP0CG47 229 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 SFTPDP35247 375 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 THBS4P35443 961 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 RAB35Q15286 201 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 FAM189A2Q15884 450 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 HES3Q5TGS1 186 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 SLC16A14Q7RTX9 510 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 CLEC1AQ8NC01 280 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 OR8B12Q8NGG6 310 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 ZNF416Q9BWM5 594 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 CACNG6Q9BXT2 260 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 AUNIPQ9H7T9 357 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 BCO1Q9HAY6 547 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 TMEM38BQ9NVV0 291 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 ABI3Q9P2A4 366 aa8.79□□□□□ -1
RAB5B-206ENST00000549505 NPIPA2E9PIF3 369 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 NPIPA3F8WFD2 350 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 TNFSF11O14788 317 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 SYNGR3O43761 229 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 B3GALNT1O75752 331 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 PSMB1P20618 241 aaKnown RBP8.78□□□□□ -1
RAB5B-206ENST00000549505 ERP29P30040 261 aaKnown RBP8.78□□□□□ -1
RAB5B-206ENST00000549505 DNASE1L1P49184 302 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 SRP9P49458 86 aaKnown RBP8.78□□□□□ -1
RAB5B-206ENST00000549505 CLDN18P56856 261 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 CARD18P57730 90 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 IFITM2Q01629 132 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 PLA2G7Q13093 441 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 ZMYND11Q15326 602 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 B3GNTL1Q67FW5 361 aaPredicted RBP8.78□□□□□ -1
RAB5B-206ENST00000549505 SIGIRRQ6IA17 410 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 NOXA1Q86UR1 476 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 PAQR4Q8N4S7 273 aaPredicted RBP8.78□□□□□ -1
RAB5B-206ENST00000549505 SPICQ8N5J4 248 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 SPERTQ8NA61 448 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 DNAAF1Q8NEP3 725 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 OR51D1Q8NGF3 324 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 ADAT3Q96EY9 351 aaPredicted RBP8.78□□□□□ -1
RAB5B-206ENST00000549505 THOC3Q96J01 351 aaKnown RBP8.78□□□□□ -1
RAB5B-206ENST00000549505 FOXN4Q96NZ1 517 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 NCKAP5O14513 1909 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 A0A1W2PPL8 197 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 ATXN8OSP0DMR3 200 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 CASRP41180 1078 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 GZMKP49863 264 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 ZNF84P51523 738 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 EFNB2P52799 333 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 ZBTB37Q5TC79 503 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 RSBN1Q5VWQ0 802 aaPredicted RBP8.78□□□□□ -1
RAB5B-206ENST00000549505 ASCL4Q6XD76 172 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 GLCCI1Q86VQ1 547 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 FAM89BQ8N5H3 189 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 ZFP62Q8NB50 900 aaPredicted RBP8.78□□□□□ -1
RAB5B-206ENST00000549505 LILRB4Q8NHJ6 448 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 DACT3Q96B18 629 aaPredicted RBP8.78□□□□□ -1
RAB5B-206ENST00000549505 UCN2Q96RP3 112 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 A8MV72 311 aaPredicted RBP8.78□□□□□ -1
RAB5B-206ENST00000549505 P2RY10O00398 339 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 PEX14O75381 377 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 SCO1O75880 301 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 LPLP06858 475 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 H2AFB2P0C5Z0 115 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 COX5BP10606 129 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 RAB3AP20336 220 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 NTF4P34130 210 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 CX3CR1P49238 355 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 CORO6Q6QEF8 472 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 DRAM2Q6UX65 266 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 OR6N1Q8NGY5 312 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 PP6455Q8WZ26 134 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 DNAJA3Q96EY1 480 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 LYZL4Q96KX0 146 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 STMN3Q9NZ72 180 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 R4GN57 208 aa8.78□□□□□ -1
RAB5B-206ENST00000549505 MEIKINA0A087WXM9 373 aa8.77□□□□□ -1.01
RAB5B-206ENST00000549505 SYT7O43581 403 aa8.77□□□□□ -1.01
RAB5B-206ENST00000549505 ACTL6AO96019 429 aa8.77□□□□□ -1.01
RAB5B-206ENST00000549505 YES1P07947 543 aa8.77□□□□□ -1.01
RAB5B-206ENST00000549505 TBPP20226 339 aa8.77□□□□□ -1.01
RAB5B-206ENST00000549505 CLDN12P56749 244 aa8.77□□□□□ -1.01
RAB5B-206ENST00000549505 ACTBP60709 375 aa8.77□□□□□ -1.01
RAB5B-206ENST00000549505 ACTG1P63261 375 aa8.77□□□□□ -1.01
RAB5B-206ENST00000549505 DHODHQ02127 395 aa8.77□□□□□ -1.01
RAB5B-206ENST00000549505 TRIP6Q15654 476 aaKnown RBP8.77□□□□□ -1.01
RAB5B-206ENST00000549505 ZNF260Q3ZCT1 412 aa8.77□□□□□ -1.01
RAB5B-206ENST00000549505 GLYATL3Q5SZD4 288 aa8.77□□□□□ -1.01
RAB5B-206ENST00000549505 TMEM42Q69YG0 159 aa8.77□□□□□ -1.01
RAB5B-206ENST00000549505 SLC25A25Q6KCM7 469 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms