RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 GRB2P62993 217 aaKnown RBP8.08□□□□□ -1.12
DDX55-208ENST00000541259 ACTG2P63267 376 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 SPOCK1Q08629 439 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 ECH1Q13011 328 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 SPHARQ15513 63 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 TBCEQ15813 527 aaPredicted RBP8.08□□□□□ -1.12
DDX55-208ENST00000541259 TREML4Q6UXN2 200 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 RHOUQ7L0Q8 258 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 PRSS45Q7RTY3 260 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 FAM220AQ7Z4H9 259 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 KCTD20Q7Z5Y7 419 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 PRSS35Q8N3Z0 413 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 SVOPQ8N4V2 548 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 FAM169BQ8N8A8 192 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 SPTSSAQ969W0 71 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 MRPL48Q96GC5 212 aaKnown RBP8.08□□□□□ -1.12
DDX55-208ENST00000541259 ZNF799Q96GE5 643 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 OR51B6Q9H340 312 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 G6PC2Q9NQR9 355 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 FAM206AQ9NX38 181 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 ZNF319Q9P2F9 582 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 NDRG3Q9UGV2 375 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 ST6GALNAC2Q9UJ37 374 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 SLC22A13Q9Y226 551 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 R4GMQ9 66 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 COL12A1Q99715 3063 aa8.08□□□□□ -1.12
DDX55-208ENST00000541259 IGHV2OR16-5A0A0B4J2B6 119 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 PNMA8CA0A1B0GUJ8 204 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 TMEM269A0A1B0GVZ9 245 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 CLDN1O95832 211 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 NGFP01138 241 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 ANXA2P07355 339 aaKnown RBP8.07□□□□□ -1.12
DDX55-208ENST00000541259 HSMCR30P0CW71 290 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 ZNF35P13682 527 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 CD40P25942 277 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 SLC6A9P48067 706 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 GBX2P52951 348 aaPredicted RBP8.07□□□□□ -1.12
DDX55-208ENST00000541259 GP2P55259 537 aaKnown RBP8.07□□□□□ -1.12
DDX55-208ENST00000541259 NAAAQ02083 359 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 TBC1D28Q2M2D7 210 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 ODF4Q2M2E3 257 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 SNAI3Q3KNW1 292 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 WDR38Q5JTN6 314 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 UBE2UQ5VVX9 321 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 FAM57BQ71RH2 274 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 CATSPERDQ86XM0 798 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 ZNF101Q8IZC7 436 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 IL17RDQ8NFM7 739 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 TMIGD2Q96BF3 282 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 OPALINQ96PE5 141 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 DOK1Q99704 481 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 MRPS26Q9BYN8 205 aaKnown RBP8.07□□□□□ -1.12
DDX55-208ENST00000541259 POFUT1Q9H488 388 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 NIPAL2Q9H841 368 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 CDH20Q9HBT6 801 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 CRIM1Q9NZV1 1036 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 FRRS1LQ9P0K9 344 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 ATPIF1Q9UII2 106 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 GTF2A1LQ9UNN4 478 aa8.07□□□□□ -1.12
DDX55-208ENST00000541259 GCN1Q92616 2671 aaKnown RBP8.06□□□□□ -1.12
DDX55-208ENST00000541259 A1L4Q6 167 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 PRSS44E7EML9 344 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 LOC110117498-PIK3R3F6TDL0 507 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 H3BSH0 61 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 OGG1O15527 345 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 CLPTM1O96005 669 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 LCATP04180 440 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 TFAP2AP05549 437 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 JUNBP17275 347 aaPredicted RBP8.06□□□□□ -1.12
DDX55-208ENST00000541259 IGFBP2P18065 325 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 PSMB9P28065 219 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 DCTDP32321 178 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 KIR2DL3P43628 341 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 BSPH1Q075Z2 132 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 ACSM1Q08AH1 577 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 ALKBH1Q13686 389 aaKnown RBP8.06□□□□□ -1.12
DDX55-208ENST00000541259 CDK5R1Q15078 307 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 TSTQ16762 297 aaKnown RBP8.06□□□□□ -1.12
DDX55-208ENST00000541259 TIGD6Q17RP2 521 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 ZNF829Q3KNS6 432 aaPredicted RBP8.06□□□□□ -1.12
DDX55-208ENST00000541259 C3orf36Q3SXR2 165 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 ARMCX4Q5H9R4 360 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 C1QTNF12Q5T7M4 302 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 FDX2Q6P4F2 183 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 DRAM2Q6UX65 266 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 RFPL4BQ6ZWI9 263 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 ZNF367Q7RTV3 350 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 EGFL6Q8IUX8 553 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 DMRTC2Q8IXT2 367 aaPredicted RBP8.06□□□□□ -1.12
DDX55-208ENST00000541259 RDH10Q8IZV5 341 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 OR8B12Q8NGG6 310 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 OR1J2Q8NGS2 313 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 OR2G2Q8NGZ5 317 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 MUL1Q969V5 352 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 PLPPR2Q96GM1 343 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 C4orf45Q96LM5 186 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 COG8Q96MW5 612 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 DACH2Q96NX9 599 aa8.06□□□□□ -1.12
DDX55-208ENST00000541259 MYCBPQ99417 103 aaPredicted RBP8.06□□□□□ -1.12
DDX55-208ENST00000541259 MGLLQ99685 303 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms