RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 SPTSSAQ969W0 71 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 TRMT61AQ96FX7 289 aaKnown RBP13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 TMED9Q9BVK6 235 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 KCNJ16Q9NPI9 418 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 OR52A1Q9UKL2 312 aa13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 SF3B6Q9Y3B4 125 aaKnown RBP13.58□□□□□ -0.24
SFSWAP-206ENST00000537582 IQCMA0A1B0GVH7 501 aa13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 H3BSA7 217 aa13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 CCRL2O00421 344 aa13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 IGKV3-15P01624 115 aa13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 CECR9P0C854 216 aa13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 GADD45AP24522 165 aa13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 WNT5AP41221 380 aa13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 MMP16P51512 607 aa13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 PRSS12P56730 875 aa13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 ECH1Q13011 328 aa13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 ZNF829Q3KNS6 432 aaPredicted RBP13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 FDX2Q6P4F2 183 aa13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 OR8B12Q8NGG6 310 aa13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 SMIM19Q96E16 107 aa13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 WFIKKN1Q96NZ8 548 aa13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 SOX7Q9BT81 388 aa13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 FUNDC2Q9BWH2 189 aa13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 PBOV1Q9GZY1 135 aa13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 OR51E2Q9H255 320 aa13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 OR51B6Q9H340 312 aa13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 OBP2BQ9NPH6 170 aa13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 NPDC1Q9NQX5 325 aaPredicted RBP13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 NDUFB11Q9NX14 153 aa13.57□□□□□ -0.24
SFSWAP-206ENST00000537582 RTTNQ86VV8 2226 aa13.56□□□□□ -0.24
SFSWAP-206ENST00000537582 FLNCQ14315 2725 aa13.56□□□□□ -0.24
SFSWAP-206ENST00000537582 M0R1B8 84 aa13.56□□□□□ -0.24
SFSWAP-206ENST00000537582 PLPP2O43688 288 aa13.56□□□□□ -0.24
SFSWAP-206ENST00000537582 IGLV1-44P01699 117 aa13.56□□□□□ -0.24
SFSWAP-206ENST00000537582 TTRP02766 147 aa13.56□□□□□ -0.24
SFSWAP-206ENST00000537582 DCTDP32321 178 aa13.56□□□□□ -0.24
SFSWAP-206ENST00000537582 TPTEP56180 551 aa13.56□□□□□ -0.24
SFSWAP-206ENST00000537582 TAS2R43P59537 309 aa13.56□□□□□ -0.24
SFSWAP-206ENST00000537582 GFOD2Q3B7J2 385 aa13.56□□□□□ -0.24
SFSWAP-206ENST00000537582 CCDC58Q4VC31 144 aa13.56□□□□□ -0.24
SFSWAP-206ENST00000537582 BCL2L15Q5TBC7 163 aa13.56□□□□□ -0.24
SFSWAP-206ENST00000537582 WFDC8Q8IUA0 241 aa13.56□□□□□ -0.24
SFSWAP-206ENST00000537582 OR51A4Q8NGJ6 313 aa13.56□□□□□ -0.24
SFSWAP-206ENST00000537582 NIPAL2Q9H841 368 aa13.56□□□□□ -0.24
SFSWAP-206ENST00000537582 P2RY10O00398 339 aa13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 CLDN14O95500 239 aa13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 NGFP01138 241 aa13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 COX5BP10606 129 aa13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 APLNRP35414 380 aa13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 TGFBR1P36897 503 aa13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 RPS11P62280 158 aaKnown RBP eCLIP13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 FABP5Q01469 135 aa13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 SRSF1Q07955 248 aaKnown RBP eCLIP13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 DRAM2Q6UX65 266 aa13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 SLC16A12Q6ZSM3 486 aa13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 P2RY8Q86VZ1 359 aa13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 CLVS1Q8IUQ0 354 aaPredicted RBP13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 ZNF101Q8IZC7 436 aa13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 ZNF808Q8N4W9 903 aaPredicted RBP13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 ZNF420Q8TAQ5 688 aaPredicted RBP13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 LINC01560Q8TB33 94 aa13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 MUCL1Q96DR8 90 aa13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 POFUT1Q9H488 388 aa13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 RNF167Q9H6Y7 350 aa13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 CRNNQ9UBG3 495 aaPredicted RBP13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 ATPIF1Q9UII2 106 aa13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 UBR5O95071 2799 aaPredicted RBP13.55□□□□□ -0.24
SFSWAP-206ENST00000537582 TBX1O43435 398 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 LMX1BO60663 402 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 GPX5O75715 221 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 LCATP04180 440 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 CALCRP30988 508 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 LSM3P62310 102 aaKnown RBP13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 SPOCK1Q08629 439 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 RFPL4BQ6ZWI9 263 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 EGFL6Q8IUX8 553 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 ELMOD2Q8IZ81 293 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 ZNF676Q8N7Q3 588 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 OR5AK2Q8NH90 309 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 OR2AE1Q8NHA4 323 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 OR51E1Q8TCB6 317 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 PGAM5Q96HS1 289 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 LYZL4Q96KX0 146 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 MED18Q9BUE0 208 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 NUFIP1Q9UHK0 495 aaKnown RBP13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 C19orf84I3L1E1 186 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 FAM157BP0CG42 384 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 GABRA5P31644 462 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 CRYBB2P43320 205 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 CCR9P51686 369 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 MRPL28Q13084 256 aaKnown RBP13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 TBC1D28Q2M2D7 210 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 XKRXQ6PP77 449 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 TMEM91Q6ZNR0 172 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 ORAI1Q96D31 301 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 CHCHD6Q9BRQ6 235 aa13.54□□□□□ -0.24
SFSWAP-206ENST00000537582 IGHV2OR16-5A0A0B4J2B6 119 aa13.53□□□□□ -0.24
SFSWAP-206ENST00000537582 LOC100506127A0A0U1RQW1 187 aa13.53□□□□□ -0.24
SFSWAP-206ENST00000537582 A0A1B0GTI1 187 aa13.53□□□□□ -0.24
SFSWAP-206ENST00000537582 LOC107986453A0A1B0GWG9 222 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms