RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 TMEM123Q8N131 208 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 GIMAP1Q8WWP7 306 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 FGGYQ96C11 551 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 ZFP64Q9NPA5 681 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 UPB1Q9UBR1 384 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 B4GALT7Q9UBV7 327 aa12.02□□□□□ -0.49
SMG6-203ENST00000536871 RALGAPA1Q6GYQ0 2036 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 A0A0J9YW62 118 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 C9orf172C9J069 976 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 UBBP0CG47 229 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 CPN1P15169 458 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 CARD18P57730 90 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 B3GALT5-AS1P59052 145 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 TAS2R19P59542 299 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 HIST1H3AP68431 136 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 Q0VFX4 171 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 ECH1Q13011 328 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 PCGF3Q3KNV8 242 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 HIST2H3PS2Q5TEC6 136 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 HIST2H3AQ71DI3 136 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 OR2W3Q7Z3T1 314 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 GLRX5Q86SX6 157 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 C20orf196Q8IYI0 205 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 GPX8Q8TED1 209 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 SFXN2Q96NB2 322 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 ULBP2Q9BZM5 246 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 PNRC2Q9NPJ4 139 aaKnown RBP12.01□□□□□ -0.49
SMG6-203ENST00000536871 TMEM9BQ9NQ34 198 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 FOXD3Q9UJU5 478 aaPredicted RBP12.01□□□□□ -0.49
SMG6-203ENST00000536871 FLVCR1Q9Y5Y0 555 aa12.01□□□□□ -0.49
SMG6-203ENST00000536871 A0A0U1RQV5 110 aa12□□□□□ -0.49
SMG6-203ENST00000536871 DCDC2BA2VCK2 349 aa12□□□□□ -0.49
SMG6-203ENST00000536871 CDX4O14627 284 aaPredicted RBP12□□□□□ -0.49
SMG6-203ENST00000536871 RAMP1O60894 148 aa12□□□□□ -0.49
SMG6-203ENST00000536871 CX3CR1P49238 355 aa12□□□□□ -0.49
SMG6-203ENST00000536871 ZNF121P58317 390 aaPredicted RBP12□□□□□ -0.49
SMG6-203ENST00000536871 SPOCK1Q08629 439 aa12□□□□□ -0.49
SMG6-203ENST00000536871 ZNF468Q5VIY5 522 aaPredicted RBP12□□□□□ -0.49
SMG6-203ENST00000536871 ABHD17BQ5VST6 288 aa12□□□□□ -0.49
SMG6-203ENST00000536871 FAM27BQ5VT28 67 aa12□□□□□ -0.49
SMG6-203ENST00000536871 ZNF283Q8N7M2 679 aa12□□□□□ -0.49
SMG6-203ENST00000536871 TMEM229BQ8NBD8 167 aa12□□□□□ -0.49
SMG6-203ENST00000536871 OR2V1Q8NHB1 315 aa12□□□□□ -0.49
SMG6-203ENST00000536871 LHFPL5Q8TAF8 219 aa12□□□□□ -0.49
SMG6-203ENST00000536871 SPTSSAQ969W0 71 aa12□□□□□ -0.49
SMG6-203ENST00000536871 CPNE4Q96A23 557 aaPredicted RBP12□□□□□ -0.49
SMG6-203ENST00000536871 NECAB3Q96P71 396 aaPredicted RBP12□□□□□ -0.49
SMG6-203ENST00000536871 FAM173AQ9BQD7 235 aa12□□□□□ -0.49
SMG6-203ENST00000536871 NOX3Q9HBY0 568 aa12□□□□□ -0.49
SMG6-203ENST00000536871 GHRLQ9UBU3 117 aa12□□□□□ -0.49
SMG6-203ENST00000536871 MRPS18BQ9Y676 258 aaKnown RBP12□□□□□ -0.49
SMG6-203ENST00000536871 COL27A1Q8IZC6 1860 aaPredicted RBP12□□□□□ -0.49
SMG6-203ENST00000536871 A0A1B0GTI1 187 aa12□□□□□ -0.49
SMG6-203ENST00000536871 H3BSH0 61 aa12□□□□□ -0.49
SMG6-203ENST00000536871 TNFSF11O14788 317 aa12□□□□□ -0.49
SMG6-203ENST00000536871 SSNA1O43805 119 aa12□□□□□ -0.49
SMG6-203ENST00000536871 CHRM2P08172 466 aa12□□□□□ -0.49
SMG6-203ENST00000536871 MELTFP08582 738 aa12□□□□□ -0.49
SMG6-203ENST00000536871 SULT1A3P0DMM9 295 aa12□□□□□ -0.49
SMG6-203ENST00000536871 SULT1A4P0DMN0 295 aa12□□□□□ -0.49
SMG6-203ENST00000536871 CDAP32320 146 aa12□□□□□ -0.49
SMG6-203ENST00000536871 DLSTP36957 453 aa12□□□□□ -0.49
SMG6-203ENST00000536871 NUBP1P53384 320 aa12□□□□□ -0.49
SMG6-203ENST00000536871 RPS18P62269 152 aaKnown RBP12□□□□□ -0.49
SMG6-203ENST00000536871 OC90Q02509 493 aaPredicted RBP12□□□□□ -0.49
SMG6-203ENST00000536871 MFAP5Q13361 173 aa12□□□□□ -0.49
SMG6-203ENST00000536871 FCN2Q15485 313 aa12□□□□□ -0.49
SMG6-203ENST00000536871 SGCAQ16586 387 aa12□□□□□ -0.49
SMG6-203ENST00000536871 RIPPLY2Q5TAB7 128 aa12□□□□□ -0.49
SMG6-203ENST00000536871 STPG1Q5TH74 334 aa12□□□□□ -0.49
SMG6-203ENST00000536871 SFRP4Q6FHJ7 346 aaPredicted RBP12□□□□□ -0.49
SMG6-203ENST00000536871 FAM46BQ96A09 425 aa12□□□□□ -0.49
SMG6-203ENST00000536871 DACT3Q96B18 629 aaPredicted RBP12□□□□□ -0.49
SMG6-203ENST00000536871 ZNF416Q9BWM5 594 aa12□□□□□ -0.49
SMG6-203ENST00000536871 C12orf4Q9NQ89 552 aa12□□□□□ -0.49
SMG6-203ENST00000536871 EIF3KQ9UBQ5 218 aaKnown RBP12□□□□□ -0.49
SMG6-203ENST00000536871 LINC00862A6NCI5 91 aa11.99□□□□□ -0.49
SMG6-203ENST00000536871 LRRC3CA6NJW4 275 aa11.99□□□□□ -0.49
SMG6-203ENST00000536871 GMDSO60547 372 aa11.99□□□□□ -0.49
SMG6-203ENST00000536871 TMIGD3P0DMS9 266 aaPredicted RBP11.99□□□□□ -0.49
SMG6-203ENST00000536871 EFNB2P52799 333 aa11.99□□□□□ -0.49
SMG6-203ENST00000536871 AIMP2Q13155 320 aaKnown RBP11.99□□□□□ -0.49
SMG6-203ENST00000536871 ZMYND11Q15326 602 aa11.99□□□□□ -0.49
SMG6-203ENST00000536871 STK11Q15831 433 aa11.99□□□□□ -0.49
SMG6-203ENST00000536871 GLDNQ6ZMI3 551 aaPredicted RBP11.99□□□□□ -0.49
SMG6-203ENST00000536871 ZNF782Q6ZMW2 699 aaPredicted RBP11.99□□□□□ -0.49
SMG6-203ENST00000536871 ABHD12BQ7Z5M8 362 aaPredicted RBP11.99□□□□□ -0.49
SMG6-203ENST00000536871 OR8B12Q8NGG6 310 aa11.99□□□□□ -0.49
SMG6-203ENST00000536871 OR51A2Q8NGJ7 313 aa11.99□□□□□ -0.49
SMG6-203ENST00000536871 OR1J2Q8NGS2 313 aa11.99□□□□□ -0.49
SMG6-203ENST00000536871 OR51E1Q8TCB6 317 aa11.99□□□□□ -0.49
SMG6-203ENST00000536871 CPT1CQ8TCG5 803 aa11.99□□□□□ -0.49
SMG6-203ENST00000536871 ASB13Q8WXK3 278 aa11.99□□□□□ -0.49
SMG6-203ENST00000536871 PSMF1Q92530 271 aa11.99□□□□□ -0.49
SMG6-203ENST00000536871 THOC3Q96J01 351 aaKnown RBP11.99□□□□□ -0.49
SMG6-203ENST00000536871 FER1L6-AS2Q96M78 137 aa11.99□□□□□ -0.49
SMG6-203ENST00000536871 ZNF385AQ96PM9 386 aaKnown RBP11.99□□□□□ -0.49
SMG6-203ENST00000536871 BEX2Q9BXY8 128 aa11.99□□□□□ -0.49
SMG6-203ENST00000536871 LRFN1Q9P244 771 aa11.99□□□□□ -0.49
SMG6-203ENST00000536871 CGGBP1Q9UFW8 167 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms