RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 MMP15P51511 669 aa18.65■□□□□ 0.58
SSPN-204ENST00000535504 TNFAIP6P98066 277 aaPredicted RBP18.65■□□□□ 0.58
SSPN-204ENST00000535504 SLC3A1Q07837 685 aa18.65■□□□□ 0.58
SSPN-204ENST00000535504 KRTAP27-1Q3LI81 207 aa18.65■□□□□ 0.58
SSPN-204ENST00000535504 ZBTB49Q6ZSB9 765 aa18.65■□□□□ 0.58
SSPN-204ENST00000535504 SLC16A9Q7RTY1 509 aa18.65■□□□□ 0.58
SSPN-204ENST00000535504 KRT77Q7Z794 578 aa18.65■□□□□ 0.58
SSPN-204ENST00000535504 BBS1Q8NFJ9 593 aa18.65■□□□□ 0.58
SSPN-204ENST00000535504 ST7LQ8TDW4 575 aa18.65■□□□□ 0.58
SSPN-204ENST00000535504 RNF133Q8WVZ7 376 aa18.65■□□□□ 0.58
SSPN-204ENST00000535504 SPRYD4Q8WW59 207 aaPredicted RBP18.65■□□□□ 0.58
SSPN-204ENST00000535504 TIMD4Q96H15 378 aa18.65■□□□□ 0.58
SSPN-204ENST00000535504 IL4I1Q96RQ9 567 aa18.65■□□□□ 0.58
SSPN-204ENST00000535504 CNN2Q99439 309 aaKnown RBP18.65■□□□□ 0.58
SSPN-204ENST00000535504 TEAD3Q99594 435 aa18.65■□□□□ 0.58
SSPN-204ENST00000535504 YIPF3Q9GZM5 350 aa18.65■□□□□ 0.58
SSPN-204ENST00000535504 TEP1Q99973 2627 aaKnown RBP18.64■□□□□ 0.57
SSPN-204ENST00000535504 IGHV1-69-2A0A0G2JMI3 117 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 PHYHO14832 338 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 TBX1O43435 398 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 XRCC2O43543 280 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 IGHV1-46P01743 117 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 ALPLP05186 524 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 SLC2A5P22732 501 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 GIFP27352 417 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 CHN2P52757 468 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 TMEM33P57088 247 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 HLXQ14774 488 aaPredicted RBP18.64■□□□□ 0.57
SSPN-204ENST00000535504 OR2T2Q6IF00 324 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 COLCA1Q6ZS62 124 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 MEPCEQ7L2J0 689 aaKnown RBP18.64■□□□□ 0.57
SSPN-204ENST00000535504 PEG10Q86TG7 708 aaKnown RBP18.64■□□□□ 0.57
SSPN-204ENST00000535504 OR5AS1Q8N127 324 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 CBR4Q8N4T8 237 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 MAPK1IP1LQ8NDC0 245 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 OR2Z1Q8NG97 314 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 OR10S1Q8NGN2 331 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 OR8J1Q8NGP2 316 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 OR13G1Q8NGZ3 307 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 RFKQ969G6 155 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 MNTQ99583 582 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 BPESC1Q9GZL8 116 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 POFUT1Q9H488 388 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 NIPAL2Q9H841 368 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 MSL2Q9HCI7 577 aa18.64■□□□□ 0.57
SSPN-204ENST00000535504 GGT3PA6NGU5 568 aa18.63■□□□□ 0.57
SSPN-204ENST00000535504 ZSCAN5BA6NJL1 495 aa18.63■□□□□ 0.57
SSPN-204ENST00000535504 SNTNA6NMZ2 147 aa18.63■□□□□ 0.57
SSPN-204ENST00000535504 PPIHO43447 177 aaKnown RBP18.63■□□□□ 0.57
SSPN-204ENST00000535504 ADH4P08319 380 aa18.63■□□□□ 0.57
SSPN-204ENST00000535504 CFL1P23528 166 aaKnown RBP18.63■□□□□ 0.57
SSPN-204ENST00000535504 ATP6V1E1P36543 226 aa18.63■□□□□ 0.57
SSPN-204ENST00000535504 POU4F2Q12837 409 aa18.63■□□□□ 0.57
SSPN-204ENST00000535504 TIGD6Q17RP2 521 aa18.63■□□□□ 0.57
SSPN-204ENST00000535504 USP51Q70EK9 711 aa18.63■□□□□ 0.57
SSPN-204ENST00000535504 OR8G5Q8NG78 346 aa18.63■□□□□ 0.57
SSPN-204ENST00000535504 FAM81AQ8TBF8 368 aa18.63■□□□□ 0.57
SSPN-204ENST00000535504 ASB17Q8WXJ9 295 aa18.63■□□□□ 0.57
SSPN-204ENST00000535504 MROQ9BYG7 248 aa18.63■□□□□ 0.57
SSPN-204ENST00000535504 OR10A2Q9H208 303 aa18.63■□□□□ 0.57
SSPN-204ENST00000535504 GSX1Q9H4S2 264 aaPredicted RBP18.63■□□□□ 0.57
SSPN-204ENST00000535504 CLDN25C9JDP6 229 aa18.62■□□□□ 0.57
SSPN-204ENST00000535504 CDC14BO60729 498 aa18.62■□□□□ 0.57
SSPN-204ENST00000535504 LY6G6DO95868 133 aa18.62■□□□□ 0.57
SSPN-204ENST00000535504 MRPL3P09001 348 aaKnown RBP18.62■□□□□ 0.57
SSPN-204ENST00000535504 EPHA2P29317 976 aa18.62■□□□□ 0.57
SSPN-204ENST00000535504 OTX1P32242 354 aaPredicted RBP18.62■□□□□ 0.57
SSPN-204ENST00000535504 OR52H1Q8NGJ2 320 aa18.62■□□□□ 0.57
SSPN-204ENST00000535504 TRUB1Q8WWH5 349 aaKnown RBP18.62■□□□□ 0.57
SSPN-204ENST00000535504 SLC22A4Q9H015 551 aa18.62■□□□□ 0.57
SSPN-204ENST00000535504 TMEM100Q9NV29 134 aa18.62■□□□□ 0.57
SSPN-204ENST00000535504 DNAJC27Q9NZQ0 273 aa18.62■□□□□ 0.57
SSPN-204ENST00000535504 WARS2Q9UGM6 360 aaKnown RBP18.62■□□□□ 0.57
SSPN-204ENST00000535504 IQCF6A8MYZ5 107 aa18.61■□□□□ 0.57
SSPN-204ENST00000535504 VWC2LB2RUY7 222 aa18.61■□□□□ 0.57
SSPN-204ENST00000535504 NCR1O76036 304 aa18.61■□□□□ 0.57
SSPN-204ENST00000535504 CRYBB2P43320 205 aa18.61■□□□□ 0.57
SSPN-204ENST00000535504 GZMKP49863 264 aa18.61■□□□□ 0.57
SSPN-204ENST00000535504 CDK5R2Q13319 367 aa18.61■□□□□ 0.57
SSPN-204ENST00000535504 GK2Q14410 553 aaPredicted RBP18.61■□□□□ 0.57
SSPN-204ENST00000535504 SNCBQ16143 134 aa18.61■□□□□ 0.57
SSPN-204ENST00000535504 RSPO1Q2MKA7 263 aaPredicted RBP18.61■□□□□ 0.57
SSPN-204ENST00000535504 GTF3AQ92664 365 aaKnown RBP18.61■□□□□ 0.57
SSPN-204ENST00000535504 PGAM5Q96HS1 289 aa18.61■□□□□ 0.57
SSPN-204ENST00000535504 SMR3AQ99954 134 aa18.61■□□□□ 0.57
SSPN-204ENST00000535504 ZNF275Q9NSD4 429 aaPredicted RBP18.61■□□□□ 0.57
SSPN-204ENST00000535504 ZNF670-ZNF695F2Z2N8 137 aa18.6■□□□□ 0.57
SSPN-204ENST00000535504 LYNX1G3V0Z9 82 aa18.6■□□□□ 0.57
SSPN-204ENST00000535504 M0R129 80 aa18.6■□□□□ 0.57
SSPN-204ENST00000535504 CD55P08174 381 aa18.6■□□□□ 0.57
SSPN-204ENST00000535504 LYNX1P0DP58 116 aa18.6■□□□□ 0.57
SSPN-204ENST00000535504 SLC2A1P11166 492 aa18.6■□□□□ 0.57
SSPN-204ENST00000535504 PSKH1P11801 424 aa18.6■□□□□ 0.57
SSPN-204ENST00000535504 COL8A2P25067 703 aa18.6■□□□□ 0.57
SSPN-204ENST00000535504 OPRL1P41146 370 aa18.6■□□□□ 0.57
SSPN-204ENST00000535504 SRP9P49458 86 aaKnown RBP18.6■□□□□ 0.57
SSPN-204ENST00000535504 TMED1Q13445 227 aa18.6■□□□□ 0.57
SSPN-204ENST00000535504 TMEM249Q2WGJ8 235 aa18.6■□□□□ 0.57
SSPN-204ENST00000535504 ZIK1Q3SY52 487 aaPredicted RBP18.6■□□□□ 0.57
SSPN-204ENST00000535504 FAM57BQ71RH2 274 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms