RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	UBQLN1	Q9UMX0	589 aa	Known RBP	3.64	□□□□□ -1.83
ATM-223	ENST00000533979	SAMHD1	Q9Y3Z3	626 aa	Known RBP	3.64	□□□□□ -1.83
ATM-223	ENST00000533979	GPR179	Q6PRD1	2367 aa		3.64	□□□□□ -1.83
ATM-223	ENST00000533979	NCOR1	O75376	2440 aa		3.64	□□□□□ -1.83
ATM-223	ENST00000533979	SCN9A	Q15858	1988 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	FLNB	O75369	2602 aa	Known RBP	3.63	□□□□□ -1.83
ATM-223	ENST00000533979	ZNF646	O15015	1829 aa	Predicted RBP	3.63	□□□□□ -1.83
ATM-223	ENST00000533979	PSME4	Q14997	1843 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	CHD6	Q8TD26	2715 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	FASN	P49327	2511 aa	Known RBP	3.63	□□□□□ -1.83
ATM-223	ENST00000533979	OR6C70	A6NIJ9	312 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	USP27X	A6NNY8	438 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979		E7ENQ6	273 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979		G3V3Y1	287 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	SLC17A2	O00624	439 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	KMO	O15229	486 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	MBTPS2	O43462	519 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	XRCC2	O43543	280 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	CLDN11	O75508	207 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	BRI3	O95415	125 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	SEMA4F	O95754	770 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	SNRPA	P09012	282 aa	Known RBP	3.63	□□□□□ -1.83
ATM-223	ENST00000533979	ACSM4	P0C7M7	580 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	RBMY1C	P0DJD4	496 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	MLN	P12872	115 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	PSMB6	P28072	239 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	OR1E1	P30953	314 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	AQP2	P41181	271 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	P2RY2	P41231	377 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	RPL29	P47914	159 aa	Known RBP	3.63	□□□□□ -1.83
ATM-223	ENST00000533979	BID	P55957	195 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	GLO1	Q04760	184 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	CHRNB3	Q05901	458 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	TNXA	Q16473	311 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	LRRC26	Q2I0M4	334 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	CNPY1	Q3B7I2	92 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	NSUN5P1	Q3KNT7	163 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	LRRTM1	Q86UE6	522 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	ZNF677	Q86XU0	584 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	PLCZ1	Q86YW0	608 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	ZNF547	Q8IVP9	402 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	C9orf40	Q8IXQ3	194 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	MCOLN2	Q8IZK6	566 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	TBC1D19	Q8N5T2	526 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	PRELID2	Q8N945	189 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	SNX31	Q8N9S9	440 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	AQP11	Q8NBQ7	271 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	OR8J2	Q8NGG1	315 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	UBA3	Q8TBC4	463 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	ZNF502	Q8TBZ5	544 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	FANK1	Q8TC84	345 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	LGALS14	Q8TCE9	139 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	GTF2H4	Q92759	462 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	RPE	Q96AT9	228 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	KLHDC3	Q9BQ90	382 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	CNPY3	Q9BT09	278 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	MED10	Q9BTT4	135 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	NMUR2	Q9GZQ4	415 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	C1orf198	Q9H425	327 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	NXF3	Q9H4D5	531 aa	Known RBP	3.63	□□□□□ -1.83
ATM-223	ENST00000533979	TRIM45	Q9H8W5	580 aa	Predicted RBP	3.63	□□□□□ -1.83
ATM-223	ENST00000533979	SLC17A7	Q9P2U7	560 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	B4GALT7	Q9UBV7	327 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	PRODH2	Q9UF12	536 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	DCDC2	Q9UHG0	476 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	CLEC2D	Q9UHP7	191 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	LGALS13	Q9UHV8	139 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	PLLP	Q9Y342	182 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	CACNG2	Q9Y698	323 aa		3.63	□□□□□ -1.83
ATM-223	ENST00000533979	TSPAN11	A1L157	253 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	ARGFX	A6NJG6	315 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	FAM220BP	B1ANY3	271 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	CENPBD1	B2RD01	187 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	PGRMC1	O00264	195 aa	Known RBP	3.62	□□□□□ -1.83
ATM-223	ENST00000533979	PLPP1	O14494	284 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	SLC9A3R1	O14745	358 aa	Predicted RBP	3.62	□□□□□ -1.83
ATM-223	ENST00000533979	SMIM24	O75264	130 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	ZMPSTE24	O75844	475 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	SC5D	O75845	299 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	CIAO1	O76071	339 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	RPP14	O95059	124 aa	Known RBP	3.62	□□□□□ -1.83
ATM-223	ENST00000533979	PLEKHA8P1	O95397	391 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	AHSA1	O95433	338 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	NSA2	O95478	260 aa	Known RBP	3.62	□□□□□ -1.83
ATM-223	ENST00000533979	FADS2	O95864	444 aa	Known RBP	3.62	□□□□□ -1.83
ATM-223	ENST00000533979	HBE1	P02100	147 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	TACSTD2	P09758	323 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	TRIM49	P0CI25	452 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	TRIM49C	P0CI26	452 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	CCDC166	P0CW27	439 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	ADORA2B	P29275	332 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	HOXA9	P31269	272 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	CSNK1A1	P48729	337 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	GPM6A	P51674	278 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	CLDN6	P56747	220 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	OR2B6	P58173	313 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	ERVPABLB-1	P60509	514 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	SLC10A7	Q0GE19	358 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	STX5	Q13190	355 aa		3.62	□□□□□ -1.83
ATM-223	ENST00000533979	SLAMF1	Q13291	335 aa		3.62	□□□□□ -1.83

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms