RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 EXOSC1Q9Y3B2 195 aaKnown RBP9.72□□□□□ -0.85
TRAPPC4-213ENST00000533149 SELENOFO60613 162 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 MRPL33O75394 65 aaKnown RBP9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 MPZL1O95297 269 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 IGHV3-9P01782 118 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 IGHA1P01876 353 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 HLA-DQA2P01906 255 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 MSMBP08118 114 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 LIMS3P0CW19 117 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 LIMS4P0CW20 117 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 MYL12AP19105 171 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 NAA10P41227 235 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 RIN1Q13671 783 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 EFNB3Q15768 340 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 SLC16A9Q7RTY1 509 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 ERI1Q8IV48 349 aaKnown RBP9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 SLC35F2Q8IXU6 374 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 TIGD4Q8IY51 512 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 NANOGP1Q8N7R0 232 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 POMGNT2Q8NAT1 580 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 OR10H4Q8NGA5 316 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 TMIGD2Q96BF3 282 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 TBX5Q99593 518 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 PLK3Q9H4B4 646 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 MARCH7Q9H992 704 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 CA10Q9NS85 328 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 DDX28Q9NUL7 540 aaKnown RBP9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 ERGIC3Q9Y282 383 aa9.71□□□□□ -0.86
TRAPPC4-213ENST00000533149 DAPL1A0PJW8 107 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 DPPA5A6NC42 116 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 POM121CA8CG34 1229 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 C12orf71A8MTZ7 269 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 ZNF99A8MXY4 864 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 ZNF593O00488 134 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 DHHO43323 396 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 UPK3AO75631 287 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 INMTO95050 263 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 PTHP01270 115 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 TFP02787 698 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 LCKP06239 509 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 OR2T7P0C7T2 308 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 NR2C1P13056 603 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 LAP3P28838 519 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 ZNF133P52736 654 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 UBA52P62987 128 aaKnown RBP9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 HSF2Q03933 536 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 UBE2UQ5VVX9 321 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 OTPQ5XKR4 325 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 FAHD2BQ6P2I3 314 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 GLB1L2Q8IW92 636 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 GPR137CQ8N3F9 429 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 WDR31Q8NA23 367 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 C1orf162Q8NEQ5 155 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 OR2T27Q8NH04 317 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 OR51F2Q8NH61 342 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 UBASH3BQ8TF42 649 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 RORBQ92753 470 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 MUL1Q969V5 352 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 FAHD2AQ96GK7 314 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 KCNS3Q9BQ31 491 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 ZNF649Q9BS31 505 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 JAM3Q9BX67 310 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 YIPF3Q9GZM5 350 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 WDR76Q9H967 626 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 BATF3Q9NR55 127 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 INPP5EQ9NRR6 644 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 MRPL22Q9NWU5 206 aaKnown RBP9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 ERVK13-1Q9NX77 482 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 MALT1Q9UDY8 824 aa9.7□□□□□ -0.86
TRAPPC4-213ENST00000533149 TRAV20A0A0B4J274 112 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 A0A1W2PPL8 197 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 A0A1W2PQL4 384 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 TMEM129A0AVI4 362 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 WNT11O96014 354 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 PNPP00491 289 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 SCG5P05408 212 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 OR4A8P0C604 315 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 GAAP10253 952 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 ZNF823P16415 610 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 CDAP32320 146 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 ACTC1P68032 377 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 ACTA1P68133 377 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 TGFBR3Q03167 851 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 ZNF85Q03923 595 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 GLO1Q04760 184 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 GALEQ14376 348 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 TBCEQ15813 527 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 ADIPOQQ15848 244 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 C10orf128Q5T292 105 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 OR2G6Q5TZ20 316 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 SATL1Q86VE3 508 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 BPIFB2Q8N4F0 458 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 ZDHHC22Q8N966 263 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 SLC26A10Q8NG04 563 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 OR6N2Q8NGY6 317 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 C11orf40Q8WZ69 217 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 FCGR1BQ92637 280 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 OR5M11Q96RB7 305 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 INTS14Q96SY0 518 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms