RNA–Protein interactions for RNA: ENST00000530075.1

GMDS-206, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-206ENST00000530075 ARMC12Q5T9G4 340 aa2.48□□□□□ -2.01
GMDS-206ENST00000530075 LRRC66Q68CR7 880 aa2.48□□□□□ -2.01
GMDS-206ENST00000530075 CBR4Q8N4T8 237 aa2.48□□□□□ -2.01
GMDS-206ENST00000530075 ZNF645Q8N7E2 425 aa2.48□□□□□ -2.01
GMDS-206ENST00000530075 OR51E1Q8TCB6 317 aa2.48□□□□□ -2.01
GMDS-206ENST00000530075 C20orf24Q9BUV8 137 aa2.48□□□□□ -2.01
GMDS-206ENST00000530075 TMEM27Q9HBJ8 222 aa2.48□□□□□ -2.01
GMDS-206ENST00000530075 EXOSC4Q9NPD3 245 aaKnown RBP2.48□□□□□ -2.01
GMDS-206ENST00000530075 PTTG3PQ9NZH4 202 aa2.48□□□□□ -2.01
GMDS-206ENST00000530075 CBY1Q9Y3M2 126 aa2.48□□□□□ -2.01
GMDS-206ENST00000530075 COL22A1Q8NFW1 1626 aaPredicted RBP2.48□□□□□ -2.01
GMDS-206ENST00000530075 PCDH11XQ9BZA7 1347 aa2.47□□□□□ -2.01
GMDS-206ENST00000530075 IGHV7-4-1A0A0J9YVY3 117 aa2.47□□□□□ -2.01
GMDS-206ENST00000530075 POLR1CO15160 346 aaPredicted RBP2.47□□□□□ -2.01
GMDS-206ENST00000530075 NMT2O60551 498 aa2.47□□□□□ -2.01
GMDS-206ENST00000530075 BMI1P35226 326 aa2.47□□□□□ -2.01
GMDS-206ENST00000530075 POLR2IP36954 125 aaKnown RBP2.47□□□□□ -2.01
GMDS-206ENST00000530075 LIPEQ05469 1076 aa2.47□□□□□ -2.01
GMDS-206ENST00000530075 CYP24A1Q07973 514 aa2.47□□□□□ -2.01
GMDS-206ENST00000530075 FAM43BQ6ZT52 329 aaPredicted RBP2.47□□□□□ -2.01
GMDS-206ENST00000530075 SPANXA2-OT1Q8N9U9 137 aa2.47□□□□□ -2.01
GMDS-206ENST00000530075 OR5K2Q8NHB8 316 aa2.47□□□□□ -2.01
GMDS-206ENST00000530075 NRBF2Q96F24 287 aa2.47□□□□□ -2.01
GMDS-206ENST00000530075 PANX1Q96RD7 426 aa2.47□□□□□ -2.01
GMDS-206ENST00000530075 RSG1Q9BU20 258 aa2.47□□□□□ -2.01
GMDS-206ENST00000530075 DHX35Q9H5Z1 703 aaKnown RBP2.47□□□□□ -2.01
GMDS-206ENST00000530075 TMEM165Q9HC07 324 aa2.47□□□□□ -2.01
GMDS-206ENST00000530075 MED4Q9NPJ6 270 aa2.47□□□□□ -2.01
GMDS-206ENST00000530075 AGPAT4Q9NRZ5 378 aa2.47□□□□□ -2.01
GMDS-206ENST00000530075 COMMD3-BMI1R4GMX3 469 aa2.47□□□□□ -2.01
GMDS-206ENST00000530075 TICRRQ7Z2Z1 1910 aa2.46□□□□□ -2.02
GMDS-206ENST00000530075 NCAPD3P42695 1498 aa2.46□□□□□ -2.02
GMDS-206ENST00000530075 HECW2Q9P2P5 1572 aa2.46□□□□□ -2.02
GMDS-206ENST00000530075 IGHV1-69DA0A0B4J2H0 117 aa2.46□□□□□ -2.02
GMDS-206ENST00000530075 OR5H1A6NKK0 313 aa2.46□□□□□ -2.02
GMDS-206ENST00000530075 SLC9A3R1O14745 358 aaPredicted RBP2.46□□□□□ -2.02
GMDS-206ENST00000530075 IGKV4-1P06312 121 aa2.46□□□□□ -2.02
GMDS-206ENST00000530075 MYL2P10916 166 aa2.46□□□□□ -2.02
GMDS-206ENST00000530075 IL32P24001 234 aa2.46□□□□□ -2.02
GMDS-206ENST00000530075 HMGN5P82970 282 aaKnown RBP2.46□□□□□ -2.02
GMDS-206ENST00000530075 PGGHGQ32M88 737 aa2.46□□□□□ -2.02
GMDS-206ENST00000530075 GUSBP11Q6P575 273 aa2.46□□□□□ -2.02
GMDS-206ENST00000530075 ZNF101Q8IZC7 436 aa2.46□□□□□ -2.02
GMDS-206ENST00000530075 CSGALNACT2Q8N6G5 542 aa2.46□□□□□ -2.02
GMDS-206ENST00000530075 CDX2Q99626 313 aaPredicted RBP2.46□□□□□ -2.02
GMDS-206ENST00000530075 CCDC77Q9BR77 488 aa2.46□□□□□ -2.02
GMDS-206ENST00000530075 TMEM38AQ9H6F2 299 aa2.46□□□□□ -2.02
GMDS-206ENST00000530075 C21orf62Q9NYP8 219 aa2.46□□□□□ -2.02
GMDS-206ENST00000530075 ARAP1Q96P48 1450 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 MRC2Q9UBG0 1479 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 FHOD3Q2V2M9 1422 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 VGLL3A8MV65 326 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 BTNL10A8MVZ5 291 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 AP3B1O00203 1094 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 CDC40O60508 579 aaKnown RBP eCLIP2.45□□□□□ -2.02
GMDS-206ENST00000530075 OR2F2O95006 317 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 CD160O95971 181 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 IGHV3-11P01762 117 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 SIGLEC14Q08ET2 396 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 GCSAMLQ5JQS6 135 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 TEX30Q5JUR7 227 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 CCDC183Q5T5S1 534 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 BRD3OSQ6XYD6 125 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 CALHM3Q86XJ0 350 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 SNX31Q8N9S9 440 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 OR6Q1Q8NGQ2 317 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 C18orf15Q96N68 181 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 TMEM243Q9BU79 118 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 ACTR3CQ9C0K3 210 aaPredicted RBP2.45□□□□□ -2.02
GMDS-206ENST00000530075 SLIRPQ9GZT3 109 aaKnown RBP2.45□□□□□ -2.02
GMDS-206ENST00000530075 ZNF160Q9HCG1 818 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 MYOZ1Q9NP98 299 aaPredicted RBP2.45□□□□□ -2.02
GMDS-206ENST00000530075 ACP6Q9NPH0 428 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 DHCR7Q9UBM7 475 aaKnown RBP2.45□□□□□ -2.02
GMDS-206ENST00000530075 NINLQ9Y2I6 1382 aa2.45□□□□□ -2.02
GMDS-206ENST00000530075 COL5A1P20908 1838 aaPredicted RBP2.45□□□□□ -2.02
GMDS-206ENST00000530075 HMGXB3Q12766 1538 aa2.44□□□□□ -2.02
GMDS-206ENST00000530075 IGKV1-27A0A075B6S5 117 aa2.44□□□□□ -2.02
GMDS-206ENST00000530075 TRAV6A0A075B6T7 132 aa2.44□□□□□ -2.02
GMDS-206ENST00000530075 IGHV3OR16-8A0A075B7F1 116 aa2.44□□□□□ -2.02
GMDS-206ENST00000530075 HUS1O60921 280 aa2.44□□□□□ -2.02
GMDS-206ENST00000530075 GTF2E2P29084 291 aaKnown RBP2.44□□□□□ -2.02
GMDS-206ENST00000530075 OTX1P32242 354 aaPredicted RBP2.44□□□□□ -2.02
GMDS-206ENST00000530075 PRLHRP49683 370 aa2.44□□□□□ -2.02
GMDS-206ENST00000530075 NDUFA8P51970 172 aa2.44□□□□□ -2.02
GMDS-206ENST00000530075 HSDL1Q3SXM5 330 aa2.44□□□□□ -2.02
GMDS-206ENST00000530075 TPTE2P1Q5T6R2 138 aa2.44□□□□□ -2.02
GMDS-206ENST00000530075 CARD17Q5XLA6 110 aa2.44□□□□□ -2.02
GMDS-206ENST00000530075 OR5T1Q8NG75 326 aa2.44□□□□□ -2.02
GMDS-206ENST00000530075 OR9G4Q8NGQ1 327 aa2.44□□□□□ -2.02
GMDS-206ENST00000530075 NRGNQ92686 78 aa2.44□□□□□ -2.02
GMDS-206ENST00000530075 PRRC1Q96M27 445 aa2.44□□□□□ -2.02
GMDS-206ENST00000530075 TGS1Q96RS0 853 aaKnown RBP2.44□□□□□ -2.02
GMDS-206ENST00000530075 CHD1O14646 1710 aa2.43□□□□□ -2.02
GMDS-206ENST00000530075 TMEM120BA0PK00 339 aa2.43□□□□□ -2.02
GMDS-206ENST00000530075 SYCE1LA8MT33 242 aa2.43□□□□□ -2.02
GMDS-206ENST00000530075 PDZK1P1A8MUH7 402 aa2.43□□□□□ -2.02
GMDS-206ENST00000530075 EIF1BO60739 113 aaKnown RBP2.43□□□□□ -2.02
GMDS-206ENST00000530075 ERLIN1O75477 346 aa2.43□□□□□ -2.02
GMDS-206ENST00000530075 WBP4O75554 376 aaKnown RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms