RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 GATA3P23771 443 aa10.4□□□□□ -0.74
VEGFA-223ENST00000523125 OTX1P32242 354 aaPredicted RBP10.4□□□□□ -0.74
VEGFA-223ENST00000523125 PMELP40967 661 aa10.4□□□□□ -0.74
VEGFA-223ENST00000523125 SLC6A9P48067 706 aa10.4□□□□□ -0.74
VEGFA-223ENST00000523125 SEC61A1P61619 476 aaKnown RBP10.4□□□□□ -0.74
VEGFA-223ENST00000523125 CRMP1Q14194 572 aa10.4□□□□□ -0.74
VEGFA-223ENST00000523125 PCK2Q16822 640 aa10.4□□□□□ -0.74
VEGFA-223ENST00000523125 FAM98BQ52LJ0 330 aaKnown RBP10.4□□□□□ -0.74
VEGFA-223ENST00000523125 SLC27A4Q6P1M0 643 aa10.4□□□□□ -0.74
VEGFA-223ENST00000523125 C1QL2Q7Z5L3 287 aa10.4□□□□□ -0.74
VEGFA-223ENST00000523125 PROKR2Q8NFJ6 384 aa10.4□□□□□ -0.74
VEGFA-223ENST00000523125 OR2T4Q8NH00 348 aa10.4□□□□□ -0.74
VEGFA-223ENST00000523125 ZNF420Q8TAQ5 688 aaPredicted RBP10.4□□□□□ -0.74
VEGFA-223ENST00000523125 ST7LQ8TDW4 575 aa10.4□□□□□ -0.74
VEGFA-223ENST00000523125 ASB9Q96DX5 294 aa10.4□□□□□ -0.74
VEGFA-223ENST00000523125 TSSK6Q9BXA6 273 aa10.4□□□□□ -0.74
VEGFA-223ENST00000523125 HCAR1Q9BXC0 346 aa10.4□□□□□ -0.74
VEGFA-223ENST00000523125 DGCR6LQ9BY27 220 aa10.4□□□□□ -0.74
VEGFA-223ENST00000523125 C1orf21Q9H246 121 aa10.4□□□□□ -0.74
VEGFA-223ENST00000523125 MMP26Q9NRE1 261 aa10.4□□□□□ -0.74
VEGFA-223ENST00000523125 DDX28Q9NUL7 540 aaKnown RBP10.4□□□□□ -0.74
VEGFA-223ENST00000523125 TBC1D23Q9NUY8 699 aa10.4□□□□□ -0.74
VEGFA-223ENST00000523125 PRPF19Q9UMS4 504 aaKnown RBP10.4□□□□□ -0.74
VEGFA-223ENST00000523125 POLR3KQ9Y2Y1 108 aaPredicted RBP10.4□□□□□ -0.74
VEGFA-223ENST00000523125 SAMHD1Q9Y3Z3 626 aaKnown RBP10.4□□□□□ -0.74
VEGFA-223ENST00000523125 COMMD3-BMI1R4GMX3 469 aa10.4□□□□□ -0.74
VEGFA-223ENST00000523125 IGHV3-64DA0A0J9YX35 117 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 M0R135 149 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 LCATP04180 440 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 HLA-DPB1P04440 258 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 GYPBP06028 91 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 CLUP10909 449 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 ZNF823P16415 610 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 SELEP16581 610 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 EPHA1P21709 976 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 SNAI3Q3KNW1 292 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 CD300LDQ6UXZ3 194 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 ADGRG5Q8IZF4 528 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 KLHL36Q8N4N3 616 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 SPICQ8N5J4 248 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 ZNF511Q8NB15 262 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 DEFB108BQ8NET1 73 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 SLCO4A1Q96BD0 722 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 ZNF799Q96GE5 643 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 NIPSNAP1Q9BPW8 284 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 C7orf69Q9H7B7 122 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 REEP1Q9H902 201 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 TMEM100Q9NV29 134 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 ARMC1Q9NVT9 282 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 PCDHB10Q9UN67 800 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 BAIAP2Q9UQB8 552 aa10.39□□□□□ -0.75
VEGFA-223ENST00000523125 A8MXK9 166 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 IFNL4K9M1U5 179 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 FOXH1O75593 365 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 RGS9O75916 674 aaPredicted RBP10.38□□□□□ -0.75
VEGFA-223ENST00000523125 ZNF205O95201 554 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 CYB5R3P00387 301 aaPredicted RBP10.38□□□□□ -0.75
VEGFA-223ENST00000523125 WNT2P09544 360 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 RAP2AP10114 183 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 SPI1P17947 270 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 MDH2P40926 338 aaKnown RBP10.38□□□□□ -0.75
VEGFA-223ENST00000523125 SRP9P49458 86 aaKnown RBP10.38□□□□□ -0.75
VEGFA-223ENST00000523125 SLC25A1P53007 311 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 TPTEP56180 551 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 MAB21L1Q13394 359 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 ZNF181Q2M3W8 571 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 TUSC1Q2TAM9 212 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 TEX30Q5JUR7 227 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 LINC01590Q5TEZ4 76 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 USP43Q70EL4 1123 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 DCXRQ7Z4W1 244 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 TMEM179BQ7Z7N9 219 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 MOGAT3Q86VF5 341 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 TEX29Q8N6K0 151 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.38□□□□□ -0.75
VEGFA-223ENST00000523125 OR2T33Q8NG76 320 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 NANPQ8TBE9 248 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 POP5Q969H6 163 aaKnown RBP10.38□□□□□ -0.75
VEGFA-223ENST00000523125 CCDC124Q96CT7 223 aaKnown RBP10.38□□□□□ -0.75
VEGFA-223ENST00000523125 FEVQ99581 238 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 CHID1Q9BWS9 393 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 TMEM165Q9HC07 324 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 FAM53CQ9NYF3 392 aa10.38□□□□□ -0.75
VEGFA-223ENST00000523125 CEACAM18A8MTB9 384 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 ZNF593O00488 134 aaPredicted RBP10.37□□□□□ -0.75
VEGFA-223ENST00000523125 DYNC1I1O14576 645 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 FSTL3O95633 263 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 FMO3P31513 532 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 GATA4P43694 442 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 ENTPD1P49961 510 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 RAD23AP54725 363 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 HILS1P60008 231 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 PAX2Q02962 417 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 ZNF92Q03936 586 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 MALLQ13021 153 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 SCGB2A2Q13296 93 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 FAM201AQ5SY85 155 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 PGAP1Q75T13 922 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 CELF2-AS1Q8N7Q2 184 aa10.37□□□□□ -0.75
VEGFA-223ENST00000523125 OR10G2Q8NGC3 310 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms