RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 GATA4P43694 442 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 SRP9P49458 86 aaKnown RBP8.79□□□□□ -1
HMGXB3-205ENST00000514469 TPTEP56180 551 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 HILS1P60008 231 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 SEC61A1P61619 476 aaKnown RBP8.79□□□□□ -1
HMGXB3-205ENST00000514469 PPP1R8Q12972 351 aaKnown RBP8.79□□□□□ -1
HMGXB3-205ENST00000514469 PCK2Q16822 640 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 MICAQ29983 383 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 ZNF181Q2M3W8 571 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 FAM98BQ52LJ0 330 aaKnown RBP8.79□□□□□ -1
HMGXB3-205ENST00000514469 OR2T5Q6IEZ7 315 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 LYPD4Q6UWN0 246 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 MUC20Q8N307 709 aaPredicted RBP8.79□□□□□ -1
HMGXB3-205ENST00000514469 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.79□□□□□ -1
HMGXB3-205ENST00000514469 CCDC197Q8NCU1 140 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 DEFB108BQ8NET1 73 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 OR2T33Q8NG76 320 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 OR9Q1Q8NGQ5 310 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 OR2T4Q8NH00 348 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 OR2T29Q8NH02 315 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 OR4Q3Q8NH05 313 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 ZNF420Q8TAQ5 688 aaPredicted RBP8.79□□□□□ -1
HMGXB3-205ENST00000514469 ZNF418Q8TF45 676 aaPredicted RBP8.79□□□□□ -1
HMGXB3-205ENST00000514469 ASB9Q96DX5 294 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 ZNF799Q96GE5 643 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 RBM4Q9BWF3 364 aaKnown RBP8.79□□□□□ -1
HMGXB3-205ENST00000514469 TSSK6Q9BXA6 273 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 HCAR1Q9BXC0 346 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 NMNAT2Q9BZQ4 307 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 REEP1Q9H902 201 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 PCDHB10Q9UN67 800 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 BAIAP2Q9UQB8 552 aa8.79□□□□□ -1
HMGXB3-205ENST00000514469 SAMHD1Q9Y3Z3 626 aaKnown RBP8.79□□□□□ -1
HMGXB3-205ENST00000514469 TENM1Q9UKZ4 2725 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 TVP23AA6NH52 213 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 CEACAM18A8MTB9 384 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 F5H5P2 479 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 SOX14O95416 240 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 FSTL3O95633 263 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 LCATP04180 440 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 RAP2AP10114 183 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 SPI1P17947 270 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 ANOS1P23352 680 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 CD200P41217 278 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 SLC6A9P48067 706 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 SLC25A1P53007 311 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 PRSS12P56730 875 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 MALLQ13021 153 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 CRMP1Q14194 572 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 GK3PQ14409 553 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 CD300LDQ6UXZ3 194 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 PGAP1Q75T13 922 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 NAA40Q86UY6 237 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 MOGAT3Q86VF5 341 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 CELF2-AS1Q8N7Q2 184 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 OR51L1Q8NGJ5 315 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 NANPQ8TBE9 248 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 Q8TCH9 128 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 SPTSSAQ969W0 71 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 SLCO4A1Q96BD0 722 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 CCDC124Q96CT7 223 aaKnown RBP8.78□□□□□ -1
HMGXB3-205ENST00000514469 NIPSNAP1Q9BPW8 284 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 C1orf21Q9H246 121 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 C7orf69Q9H7B7 122 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 ARMC1Q9NVT9 282 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 LRCH1Q9Y2L9 728 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 U3KQV3 271 aa8.78□□□□□ -1
HMGXB3-205ENST00000514469 ARRDC5A6NEK1 342 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 TRAPPC2LH3BP13 241 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 ACOT8O14734 319 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 CYB5R3P00387 301 aaPredicted RBP8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 HLA-DPB1P04440 258 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 GYPBP06028 91 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 ZNF12P17014 697 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 CPT2P23786 658 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 ENTPD1P49961 510 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 RAD23AP54725 363 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 ZNF154Q13106 437 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 MAB21L1Q13394 359 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 TUSC1Q2TAM9 212 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 SNAI3Q3KNW1 292 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 ZNF404Q494X3 552 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 ESCO2Q56NI9 601 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 TEX30Q5JUR7 227 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 DRAM2Q6UX65 266 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 MRPL21Q7Z2W9 205 aaKnown RBP8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 DCXRQ7Z4W1 244 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 ADGRG5Q8IZF4 528 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 OR10G2Q8NGC3 310 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 SLAMF6Q96DU3 332 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 CLPTM1LQ96KA5 538 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 SLC6A7Q99884 636 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 SUCNR1Q9BXA5 334 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 MMP26Q9NRE1 261 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 CMC2Q9NRP2 79 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 TMEM100Q9NV29 134 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 TAS2R1Q9NYW7 299 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 INSIG2Q9Y5U4 225 aa8.77□□□□□ -1.01
HMGXB3-205ENST00000514469 IGHV3-64DA0A0J9YX35 117 aa8.76□□□□□ -1.01
HMGXB3-205ENST00000514469 C5orf63A6NC05 138 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms