RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 RAB6AP20340 208 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 RORAP35398 523 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 SLC6A8P48029 635 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 HOXA1P49639 335 aaPredicted RBP10.59□□□□□ -0.71
UBE3D-206ENST00000505226 BLOC1S1P78537 153 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 DHRS7BQ6IAN0 325 aaPredicted RBP10.59□□□□□ -0.71
UBE3D-206ENST00000505226 COA4Q9NYJ1 87 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 FAM96BQ9Y3D0 163 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 TRBV6-7A0A0A0MS04 114 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 BLACEA4D250 179 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 MS4A18H0YCH9 400 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 TSPAN2O60636 221 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 MT-ATP6P00846 226 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 PI3P19957 117 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 MS4A18Q3C1V0 323 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 NKAPLQ5M9Q1 402 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 H3F3CQ6NXT2 135 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 BAP18Q8IXM2 172 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 CCDC36Q8IYA8 594 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 TMEM230Q96A57 120 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 TCTN2Q96GX1 697 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 SOX7Q9BT81 388 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 DUSP15Q9H1R2 295 aaPredicted RBP10.59□□□□□ -0.71
UBE3D-206ENST00000505226 FBRSQ9HAH7 460 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 CENPMQ9NSP4 180 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 HS3ST3A1Q9Y663 406 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 ARID1AO14497 2285 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 ADAM10O14672 748 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 TTRP02766 147 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 GP1BBP13224 206 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 GABRG2P18507 467 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 GALNSP34059 522 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 RAB13P51153 203 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 FOXL2P58012 376 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 EBPQ15125 230 aaKnown RBP10.58□□□□□ -0.72
UBE3D-206ENST00000505226 MICBQ29980 383 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 HOGA1Q86XE5 327 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 C12orf57Q99622 126 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 CMSS1Q9BQ75 279 aaKnown RBP10.58□□□□□ -0.72
UBE3D-206ENST00000505226 OR5AC2Q9NZP5 309 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 CARHSP1Q9Y2V2 147 aaKnown RBP10.58□□□□□ -0.72
UBE3D-206ENST00000505226 TCRBV21S2A2A0A5A6 115 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 MEX3AA1L020 520 aaKnown RBP10.58□□□□□ -0.72
UBE3D-206ENST00000505226 C2orf72A6NCS6 295 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 METTL21EPA6NDL7 271 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 ALG1L2C9J202 215 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 LINC01387J3KSC0 135 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 SEMA4FO95754 770 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 IGHMP01871 453 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 CTSEP14091 401 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 RABIFP47224 123 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 PLAC9Q5JTB6 97 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 COL13A1Q5TAT6 717 aaPredicted RBP10.58□□□□□ -0.72
UBE3D-206ENST00000505226 TMEM104Q8NE00 496 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 ARL5BQ96KC2 179 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 LRRC61Q9BV99 259 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 C5orf66Q9H5L9 145 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 FAM206AQ9NX38 181 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 WBP1LQ9NX94 342 aa10.58□□□□□ -0.72
UBE3D-206ENST00000505226 ARPC4-TTLL3A0A0A6YYG9 625 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 EPOPA6NHQ4 379 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 C10orf142B7Z368 130 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 FTCDNL1E5RQL4 147 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 THEGLP0DJG4 465 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 PVALBP20472 110 aaPredicted RBP10.57□□□□□ -0.72
UBE3D-206ENST00000505226 IL12BP29460 328 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 GNALP38405 381 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 EIF1AXP47813 144 aaKnown RBP10.57□□□□□ -0.72
UBE3D-206ENST00000505226 KCNJ3P48549 501 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 SLC26A5P58743 744 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 PCK2Q16822 640 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 FAHD2BQ6P2I3 314 aaPredicted RBP10.57□□□□□ -0.72
UBE3D-206ENST00000505226 C16orf47Q6ZP98 133 aaPredicted RBP10.57□□□□□ -0.72
UBE3D-206ENST00000505226 OR10R2Q8NGX6 335 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 ADAMTS18Q8TE60 1221 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 C2CD4CQ8TF44 421 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 FAHD2AQ96GK7 314 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 USB1Q9BQ65 265 aaKnown RBP10.57□□□□□ -0.72
UBE3D-206ENST00000505226 MED29Q9NX70 200 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 IGKV3D-11A0A0A0MRZ8 115 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 A8MVM7 634 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 MTRF1O75570 445 aaKnown RBP10.57□□□□□ -0.72
UBE3D-206ENST00000505226 SPP1P10451 314 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 TPT1P13693 172 aaKnown RBP10.57□□□□□ -0.72
UBE3D-206ENST00000505226 NPY4RP50391 375 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 POLR2HP52434 150 aaKnown RBP10.57□□□□□ -0.72
UBE3D-206ENST00000505226 B2MP61769 119 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 SGCAQ16586 387 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 DMRTC1Q5HYR2 192 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 C9orf50Q5SZB4 431 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 TTLL10Q6ZVT0 673 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 COX15Q7KZN9 410 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 ZFP82Q8N141 532 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 NKAIN3Q8N8D7 197 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 OR10S1Q8NGN2 331 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 TBL1XR1Q9BZK7 514 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 SLC7A5P2Q9GIP4 190 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 ATXN7L1Q9ULK2 861 aaPredicted RBP10.57□□□□□ -0.72
UBE3D-206ENST00000505226 A0A1W2PP11 408 aa10.57□□□□□ -0.72
UBE3D-206ENST00000505226 RAD51DO75771 328 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms