RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 CLDN15P56746 228 aa14.96□□□□□ -0.01
PCDHA1-203ENST00000504120 PROCRQ9UNN8 238 aa14.96□□□□□ -0.01
PCDHA1-203ENST00000504120 A0A087WUJ7 227 aa14.96□□□□□ -0.02
PCDHA1-203ENST00000504120 PRRG2O14669 202 aa14.96□□□□□ -0.02
PCDHA1-203ENST00000504120 IL2RAP01589 272 aa14.96□□□□□ -0.02
PCDHA1-203ENST00000504120 EPXP11678 715 aa14.96□□□□□ -0.02
PCDHA1-203ENST00000504120 NPBWR1P48145 328 aa14.96□□□□□ -0.02
PCDHA1-203ENST00000504120 DMWDQ09019 674 aa14.96□□□□□ -0.02
PCDHA1-203ENST00000504120 Q6ZRG5 221 aa14.96□□□□□ -0.02
PCDHA1-203ENST00000504120 BATF2Q8N1L9 274 aa14.96□□□□□ -0.02
PCDHA1-203ENST00000504120 ASB13Q8WXK3 278 aa14.96□□□□□ -0.02
PCDHA1-203ENST00000504120 LRRC61Q9BV99 259 aa14.96□□□□□ -0.02
PCDHA1-203ENST00000504120 FBXL4Q9UKA2 621 aa14.96□□□□□ -0.02
PCDHA1-203ENST00000504120 LINC01565O15544 149 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 PRKNO60260 465 aaPredicted RBP14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 CD3DP04234 171 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 ACKR3P25106 362 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 FOXF1Q12946 379 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 AQP6Q13520 282 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 SNTB1Q13884 538 aaKnown RBP14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 NUDCD2Q8WVJ2 157 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 SLC25A32Q9H2D1 315 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 WSB2Q9NYS7 404 aaPredicted RBP14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 C2CD4DB7Z1M9 353 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 K7EQM0 130 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 RAC1P63000 192 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 IL20Q9NYY1 176 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 SERTM1A2A2V5 107 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 ASPDHA6ND91 283 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 OR5H14A6NHG9 310 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 OR4E1P0C645 316 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 TOMM34Q15785 309 aaPredicted RBP14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 ELFN2Q5R3F8 820 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 H3F3CQ6NXT2 135 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 IL34Q6ZMJ4 242 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 EXD3Q8N9H8 876 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 TIMD4Q96H15 378 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 ZNF75AQ96N20 296 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 SPACA5Q96QH8 159 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 PTDSS2Q9BVG9 487 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 GABRG2P18507 467 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 HES1Q14469 280 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 MFSD4AQ8N468 514 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 TP53I13Q8NBR0 393 aaPredicted RBP14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 SRRQ9GZT4 340 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 PLEKHA2Q9HB19 425 aa14.95□□□□□ -0.02
PCDHA1-203ENST00000504120 A0A0B4J203 849 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 SDCBPO00560 298 aaPredicted RBP14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 ALX3O95076 343 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 MAGEB1P43366 347 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 RAE1P78406 368 aaKnown RBP14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 NKG7Q16617 165 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 ZNF468Q5VIY5 522 aaPredicted RBP14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 OR1N1Q8NGS0 311 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 GPX8Q8TED1 209 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 SPACA9Q96E40 222 aaPredicted RBP14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 BSCL2Q96G97 398 aaPredicted RBP14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 STRAPQ9Y3F4 350 aaKnown RBP14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 TMEM182Q6ZP80 229 aaPredicted RBP14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 ZDHHC23Q8IYP9 409 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 ARHGEF39Q8N4T4 335 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 RDH5Q92781 318 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 ZC3HAV1LQ96H79 300 aaKnown RBP14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 UFSP2Q9NUQ7 469 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 TMEFF2Q9UIK5 374 aaPredicted RBP14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 KCNE3Q9Y6H6 103 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 COL4A1P02462 1669 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 TUBGCP6Q96RT7 1819 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 TNFSF11O14788 317 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 CRYAAP02489 173 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 OR13C7P0DN81 318 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 ELLP55199 621 aaPredicted RBP14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 TMPRSS11FQ6ZWK6 438 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 BHLHA9Q7RTU4 235 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 SMIM4Q8WVI0 70 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 TRIB1Q96RU8 372 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 RHNO1Q9BSD3 238 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 SUCNR1Q9BXA5 334 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 C1QTNF6Q9BXI9 259 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 PLA2G12AQ9BZM1 189 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 ADAM19Q9H013 955 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 FOXJ3Q9UPW0 622 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 HRH1P35367 487 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 SLC6A13Q9NSD5 602 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 LIN7CQ9NUP9 197 aaKnown RBP14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 A0A096LPE4 126 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 A0A1W2PPZ6 126 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 SIRPB1O00241 398 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 NKX2-2O95096 273 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 MGST1P10620 155 aaKnown RBP14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 GLRA1P23415 457 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 TAF9Q16594 264 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 FAM74A1Q5RGS3 127 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 ZNF439Q8NDP4 499 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 SLC35E1Q96K37 410 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 AK3Q9UIJ7 227 aa14.94□□□□□ -0.02
PCDHA1-203ENST00000504120 E5RGE8 158 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 XRCC3O43542 346 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 OR5H8P0DN80 308 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 FCGR2CP31995 323 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms