RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 PRAMEF6Q5VXH4 476 aa13.31□□□□□ -0.28
MUC1-220ENST00000498431 HACD2Q6Y1H2 254 aa13.31□□□□□ -0.28
MUC1-220ENST00000498431 VTCN1Q7Z7D3 282 aa13.31□□□□□ -0.28
MUC1-220ENST00000498431 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.31□□□□□ -0.28
MUC1-220ENST00000498431 GLB1L2Q8IW92 636 aa13.31□□□□□ -0.28
MUC1-220ENST00000498431 FAM156AQ8NDB6 213 aa13.31□□□□□ -0.28
MUC1-220ENST00000498431 SSMEM1Q8WWF3 244 aa13.31□□□□□ -0.28
MUC1-220ENST00000498431 DYRK2Q92630 601 aa13.31□□□□□ -0.28
MUC1-220ENST00000498431 SH3GL1Q99961 368 aa13.31□□□□□ -0.28
MUC1-220ENST00000498431 UFSP2Q9NUQ7 469 aa13.31□□□□□ -0.28
MUC1-220ENST00000498431 TMEM100Q9NV29 134 aa13.31□□□□□ -0.28
MUC1-220ENST00000498431 GMPR2Q9P2T1 348 aaKnown RBP13.31□□□□□ -0.28
MUC1-220ENST00000498431 ATPIF1Q9UII2 106 aa13.31□□□□□ -0.28
MUC1-220ENST00000498431 LHFPL6Q9Y693 200 aa13.31□□□□□ -0.28
MUC1-220ENST00000498431 SLC22A31A6NKX4 558 aa13.3□□□□□ -0.28
MUC1-220ENST00000498431 P2RY10O00398 339 aa13.3□□□□□ -0.28
MUC1-220ENST00000498431 AHCYL1O43865 530 aa13.3□□□□□ -0.28
MUC1-220ENST00000498431 KHDRBS3O75525 346 aaKnown RBP13.3□□□□□ -0.28
MUC1-220ENST00000498431 FCN3O75636 299 aa13.3□□□□□ -0.28
MUC1-220ENST00000498431 CALB2P22676 271 aa13.3□□□□□ -0.28
MUC1-220ENST00000498431 RAD23AP54725 363 aa13.3□□□□□ -0.28
MUC1-220ENST00000498431 SELENOWP63302 87 aa13.3□□□□□ -0.28
MUC1-220ENST00000498431 HIST1H3AP68431 136 aa13.3□□□□□ -0.28
MUC1-220ENST00000498431 TRAM2Q15035 370 aa13.3□□□□□ -0.28
MUC1-220ENST00000498431 PDCD1Q15116 288 aa13.3□□□□□ -0.28
MUC1-220ENST00000498431 ZBED5Q49AG3 693 aa13.3□□□□□ -0.28
MUC1-220ENST00000498431 HIST2H3PS2Q5TEC6 136 aa13.3□□□□□ -0.28
MUC1-220ENST00000498431 ERICH5Q6P6B1 374 aa13.3□□□□□ -0.28
MUC1-220ENST00000498431 ZNF730Q6ZMV8 503 aa13.3□□□□□ -0.28
MUC1-220ENST00000498431 PTCHD4Q6ZW05 846 aa13.3□□□□□ -0.28
MUC1-220ENST00000498431 HIST2H3AQ71DI3 136 aa13.3□□□□□ -0.28
MUC1-220ENST00000498431 FAM110DQ8TAY7 271 aaPredicted RBP13.3□□□□□ -0.28
MUC1-220ENST00000498431 Q8TCH9 128 aa13.3□□□□□ -0.28
MUC1-220ENST00000498431 ACOT11Q8WXI4 607 aaPredicted RBP13.3□□□□□ -0.28
MUC1-220ENST00000498431 HOPXQ9BPY8 73 aaPredicted RBP13.3□□□□□ -0.28
MUC1-220ENST00000498431 FNDC11Q9BVV2 318 aa13.3□□□□□ -0.28
MUC1-220ENST00000498431 MMADHCQ9H3L0 296 aaPredicted RBP13.3□□□□□ -0.28
MUC1-220ENST00000498431 SMURF1Q9HCE7 757 aa13.3□□□□□ -0.28
MUC1-220ENST00000498431 ACOXLQ9NUZ1 547 aa13.3□□□□□ -0.28
MUC1-220ENST00000498431 A0A0U1RQK1 487 aa13.29□□□□□ -0.28
MUC1-220ENST00000498431 FAM220BPB1ANY3 271 aa13.29□□□□□ -0.28
MUC1-220ENST00000498431 DCTN6O00399 190 aa13.29□□□□□ -0.28
MUC1-220ENST00000498431 IRF2P14316 349 aa13.29□□□□□ -0.28
MUC1-220ENST00000498431 RPL15P61313 204 aaKnown RBP13.29□□□□□ -0.28
MUC1-220ENST00000498431 GK2Q14410 553 aaPredicted RBP13.29□□□□□ -0.28
MUC1-220ENST00000498431 KCNMB1Q16558 191 aa13.29□□□□□ -0.28
MUC1-220ENST00000498431 SFRP4Q6FHJ7 346 aaPredicted RBP13.29□□□□□ -0.28
MUC1-220ENST00000498431 CORO6Q6QEF8 472 aa13.29□□□□□ -0.28
MUC1-220ENST00000498431 COLCA1Q6ZS62 124 aa13.29□□□□□ -0.28
MUC1-220ENST00000498431 TMPRSS11FQ6ZWK6 438 aa13.29□□□□□ -0.28
MUC1-220ENST00000498431 MBOAT2Q6ZWT7 520 aa13.29□□□□□ -0.28
MUC1-220ENST00000498431 ARPINQ7Z6K5 226 aa13.29□□□□□ -0.28
MUC1-220ENST00000498431 GATAD2BQ8WXI9 593 aa13.29□□□□□ -0.28
MUC1-220ENST00000498431 LHX4Q969G2 390 aa13.29□□□□□ -0.28
MUC1-220ENST00000498431 WDFY2Q96P53 400 aa13.29□□□□□ -0.28
MUC1-220ENST00000498431 TSSK2Q96PF2 358 aa13.29□□□□□ -0.28
MUC1-220ENST00000498431 COQ7Q99807 217 aa13.29□□□□□ -0.28
MUC1-220ENST00000498431 NUAK2Q9H093 628 aa13.29□□□□□ -0.28
MUC1-220ENST00000498431 SIRPDQ9H106 197 aa13.29□□□□□ -0.28
MUC1-220ENST00000498431 RASSF4Q9H2L5 321 aa13.29□□□□□ -0.28
MUC1-220ENST00000498431 NMNAT1Q9HAN9 279 aaPredicted RBP13.29□□□□□ -0.28
MUC1-220ENST00000498431 TCF7L1Q9HCS4 588 aa13.29□□□□□ -0.28
MUC1-220ENST00000498431 VSX1Q9NZR4 365 aaPredicted RBP13.29□□□□□ -0.28
MUC1-220ENST00000498431 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.29□□□□□ -0.28
MUC1-220ENST00000498431 POLR1DQ9Y2S0 133 aa13.29□□□□□ -0.28
MUC1-220ENST00000498431 IGHV1-69DA0A0B4J2H0 117 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 C3orf80F5H4A9 247 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 SOCS2O14508 198 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 IGHV1-69P01742 117 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 T-ENOLP0DO92 83 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 SDHAP31040 664 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 IFNA8P32881 189 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 CD200P41217 278 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 IER3P46695 156 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 NPY4RP50391 375 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 MXRA7P84157 204 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 HIST2H2BDQ6DRA6 164 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 Q6ZSV7 163 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 NAA40Q86UY6 237 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 PDZD9Q8IXQ8 264 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 RNF113BQ8IZP6 322 aaKnown RBP13.28□□□□□ -0.28
MUC1-220ENST00000498431 BOLLQ8N9W6 283 aaKnown RBP13.28□□□□□ -0.28
MUC1-220ENST00000498431 OR11L1Q8NGX0 322 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 TBC1D15Q8TC07 691 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 HCAR1Q9BXC0 346 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 HDHD2Q9H0R4 259 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 NDE1Q9NXR1 346 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 KIF17Q9P2E2 1029 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 RPS6KA6Q9UK32 745 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 AP3M1Q9Y2T2 418 aa13.28□□□□□ -0.28
MUC1-220ENST00000498431 B2RBV5 119 aa13.27□□□□□ -0.29
MUC1-220ENST00000498431 ADAM20O43506 726 aa13.27□□□□□ -0.29
MUC1-220ENST00000498431 IFNW1P05000 195 aa13.27□□□□□ -0.29
MUC1-220ENST00000498431 CDKN2AP42771 156 aaKnown RBP13.27□□□□□ -0.29
MUC1-220ENST00000498431 FXYD6P3P58550 94 aa13.27□□□□□ -0.29
MUC1-220ENST00000498431 PSME3P61289 254 aa13.27□□□□□ -0.29
MUC1-220ENST00000498431 GABPB1Q06547 395 aaPredicted RBP13.27□□□□□ -0.29
MUC1-220ENST00000498431 KRTAP27-1Q3LI81 207 aa13.27□□□□□ -0.29
MUC1-220ENST00000498431 CD276Q5ZPR3 534 aa13.27□□□□□ -0.29
MUC1-220ENST00000498431 C8orf82Q6P1X6 216 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms