RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 PLATP00750 562 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 TGFAP01135 160 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 IL1AP01583 271 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 HLA-DQB1P01920 261 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 CRYAAP02489 173 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 C1QBP02746 253 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 ITGA5P08648 1049 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 GALP22466 123 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 EDNRAP25101 427 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 MPGP29372 298 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 C21orf33P30042 268 aaPredicted RBP4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 SLC1A3P43003 542 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 OR1E2P47887 323 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 IDH2P48735 452 aaKnown RBP4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 KHKP50053 298 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 PPOXP50336 477 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 ANXA11P50995 505 aaKnown RBP4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 PTTG1IPP53801 180 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 UBE2NP61088 152 aaKnown RBP4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 LSM3P62310 102 aaKnown RBP4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 ACTG1P63261 375 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 SLC35A1P78382 337 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 ST3GAL4Q11206 333 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 C1DQ13901 141 aaKnown RBP4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 GNA13Q14344 377 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 PTGES3Q15185 160 aaKnown RBP4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 ZNF141Q15928 474 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 GPAT3Q53EU6 434 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 ESCO2Q56NI9 601 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 SLC25A30Q5SVS4 291 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 ATAD3CQ5T2N8 411 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 C9orf135Q5VTT2 229 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 PRAMEF8Q5VWM4 474 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 PRAMEF7Q5VXH5 474 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 C12orf73Q69YU5 71 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 MEX3DQ86XN8 651 aaKnown RBP4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 RDH10Q8IZV5 341 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 LINC00471Q8N535 108 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 ARIH2OSQ8N7S6 290 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 POMGNT2Q8NAT1 580 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 GPR32P1Q8NGA4 272 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 OR9Q2Q8NGE9 314 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 OR52J3Q8NH60 311 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 SLC38A5Q8WUX1 472 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 DNAJA4Q8WW22 397 aaPredicted RBP4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 SLC7A6Q92536 515 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 MSI2Q96DH6 328 aaKnown RBP4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 TMEM19Q96HH6 336 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 SORCS2Q96PQ0 1159 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 ZNF607Q96SK3 696 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 ARPC5LQ9BPX5 153 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 AIFM2Q9BRQ8 373 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 NAA11Q9BSU3 229 aaPredicted RBP4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 FUZQ9BT04 418 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 KATNB1Q9BVA0 655 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 TAPBPLQ9BX59 468 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 BPESC1Q9GZL8 116 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 C6orf62Q9GZU0 229 aaPredicted RBP4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 ZNF350Q9GZX5 532 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 RAB1BQ9H0U4 201 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 NMNAT1Q9HAN9 279 aaPredicted RBP4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 CACYBPQ9HB71 228 aaKnown RBP4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 SLC25A19Q9HC21 320 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 DYNLRB1Q9NP97 96 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 RPRD1BQ9NQG5 326 aaKnown RBP4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 EXOSC3Q9NQT5 275 aaKnown RBP4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 SLC17A5Q9NRA2 495 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 CA10Q9NS85 328 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 ZNF275Q9NSD4 429 aaPredicted RBP4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 ACOXLQ9NUZ1 547 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 GLS2Q9UI32 602 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 TMCC3Q9ULS5 477 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 PRELID1Q9Y255 219 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 WDR45Q9Y484 360 aa4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 HRNRQ86YZ3 2850 aaPredicted RBP4.99□□□□□ -1.61
CACNA1C-229ENST00000496818 IGHV4-61A0A0C4DH41 118 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 TRBV4-1A0A0J9YWV2 114 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 A0A1W2PRQ8 180 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 SNTNA6NMZ2 147 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 ZNF785A8K8V0 405 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 B9A039 149 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 ZNF587BE7ETH6 402 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 HMGN4O00479 90 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 SLC43A1O75387 559 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 LY6HO94772 140 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 TPPPO94811 219 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 PTHP01270 115 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 BCHEP06276 602 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 H1F0P07305 194 aaKnown RBP4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 PSMA1P25786 263 aaKnown RBP4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 GTF2E2P29084 291 aaKnown RBP4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 IFNA8P32881 189 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 SERPINF1P36955 418 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 CAPZA2P47755 286 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 RORCP51449 518 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 POLR2HP52434 150 aaKnown RBP4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 BTG1P62324 171 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 COX10Q12887 443 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 MAPK11Q15759 364 aa4.98□□□□□ -1.61
CACNA1C-229ENST00000496818 GABRA6Q16445 453 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms