RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 PLXND1Q9Y4D7 1925 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 MYO15AQ9UKN7 3530 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 TMEM212A6NML5 194 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 B4DEV8 164 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 ITGB1BP1O14713 200 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 STK17BO94768 372 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 LYPD3O95274 346 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 GYPBP06028 91 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 ST6GAL1P15907 406 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 ERVFC1-1P60608 527 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 MEF2AQ02078 507 aaPredicted RBP8.14□□□□□ -1.11
HPS4-217ENST00000496385 DUSP8Q13202 625 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 MIDNQ504T8 468 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 TMEM128Q5BJH2 165 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 Q6ZNB5 142 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 TMEM183AQ8IXX5 376 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 OR2AP1Q8NGE2 309 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 ROBO4Q8WZ75 1007 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 CDS1Q92903 461 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 ZG16BQ96DA0 208 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 SHDQ96IW2 340 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 C5orf34Q96MH7 638 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 GNRHR2Q96P88 292 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 ZNF587Q96SQ5 575 aaPredicted RBP8.14□□□□□ -1.11
HPS4-217ENST00000496385 AIF1LQ9BQI0 150 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 SPHK2Q9NRA0 654 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 C20orf141Q9NUB4 165 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 CHRNA9Q9UGM1 479 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 KCNK6Q9Y257 313 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 MDC1Q14676 2089 aaKnown RBP8.14□□□□□ -1.11
HPS4-217ENST00000496385 DMDP11532 3685 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 TMEM235A6NFC5 223 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 TP53I11O14683 189 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 TBX6O95947 436 aaPredicted RBP8.13□□□□□ -1.11
HPS4-217ENST00000496385 MAS1P04201 325 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 RPLP1P05386 114 aaKnown RBP8.13□□□□□ -1.11
HPS4-217ENST00000496385 F3P13726 295 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 FOLR1P15328 257 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 ZNF16P17020 682 aaPredicted RBP8.13□□□□□ -1.11
HPS4-217ENST00000496385 GJA4P35212 333 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 NAA10P41227 235 aaPredicted RBP8.13□□□□□ -1.11
HPS4-217ENST00000496385 H3F3AP84243 136 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 OR1Q1Q15612 314 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 ITPRIPL2Q3MIP1 535 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 HIKESHIQ53FT3 197 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 PRAMEF14Q5SWL7 426 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 MED25Q71SY5 747 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 OR52E2Q8NGJ4 325 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 OR13C3Q8NGS6 347 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 PFN4Q8NHR9 129 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 Q8WTZ3 238 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 SLC41A2Q96JW4 573 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 OR2M4Q96R27 311 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 ATG101Q9BSB4 218 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 NELFAQ9H3P2 528 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 C5AR2Q9P296 337 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 KCNE3Q9Y6H6 103 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 TLCD2A6NGC4 264 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 TSPAN6O43657 245 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 TMPRSS11DO60235 418 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 TBL1XO60907 577 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 TRGC1P0CF51 173 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 C6P13671 934 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 THBS4P35443 961 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 GABREP78334 506 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 ZXDAP98168 799 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 RASGEF1BQ0VAM2 473 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 IL15RAQ13261 267 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 RAB35Q15286 201 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 RPUSD3Q6P087 351 aaKnown RBP8.13□□□□□ -1.11
HPS4-217ENST00000496385 WDR88Q6ZMY6 472 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 ZNF573Q86YE8 665 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 LMNTD1Q8N9Z9 388 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 SUMF2Q8NBJ7 301 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 ZNF740Q8NDX6 193 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 OR8G5Q8NG78 346 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 OR2L8Q8NGY9 312 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 OR5K2Q8NHB8 316 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 POC1BQ8TC44 478 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 WFDC5Q8TCV5 224 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 CASTOR1Q8WTX7 329 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 SCGB3A2Q96PL1 93 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 TTTY10Q9BZA0 68 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 TMEM242Q9NWH2 141 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 OBP2AQ9NY56 170 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 DKKL1Q9UK85 242 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 TMED7Q9Y3B3 224 aa8.13□□□□□ -1.11
HPS4-217ENST00000496385 TRAV8-7A0A075B6U6 113 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 LOC100509620A0A075B734 347 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 CEACAM18A8MTB9 384 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 KCNAB3O43448 404 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 UPK3AO75631 287 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 TK1P04183 234 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 ADH5P11766 374 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 PDX1P52945 283 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 SNRPD1P62314 119 aaKnown RBP8.12□□□□□ -1.11
HPS4-217ENST00000496385 EBPQ15125 230 aaKnown RBP8.12□□□□□ -1.11
HPS4-217ENST00000496385 DUSP5Q16690 384 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 GAB4Q2WGN9 574 aa8.12□□□□□ -1.11
HPS4-217ENST00000496385 COA6Q5JTJ3 125 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms