RNA–Protein interactions for RNA: ENST00000496027.5

CCDC13-209, Transcript of coiled-coil domain containing 13, humanhuman

TSL 5

Gene CCDC13, Length 386 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-209ENST00000496027 PPP1R3CQ9UQK1 317 aa11.3□□□□□ -0.6
CCDC13-209ENST00000496027 AP4S1Q9Y587 144 aa11.3□□□□□ -0.6
CCDC13-209ENST00000496027 COMMD3-BMI1R4GMX3 469 aa11.3□□□□□ -0.6
CCDC13-209ENST00000496027 A0A1B0GWJ7 208 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 TVP23AA6NH52 213 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 ZNF878C9JN71 531 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 G3V2T6 193 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 CIB2O75838 187 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 MSMBP08118 114 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 SPARCP09486 303 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 PRKACGP22612 351 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 CFL1P23528 166 aaKnown RBP11.29□□□□□ -0.6
CCDC13-209ENST00000496027 GATA3P23771 443 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 DDOSTP39656 456 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 ESRRGP62508 458 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 MVKQ03426 396 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 MZT1Q08AG7 82 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 SCGB2A2Q13296 93 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 HLXQ14774 488 aaPredicted RBP11.29□□□□□ -0.6
CCDC13-209ENST00000496027 SNCBQ16143 134 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 C1orf146Q5VVC0 180 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 OTPQ5XKR4 325 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 OR2T2Q6IF00 324 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 PRIMA1Q86XR5 153 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 KLBQ86Z14 1044 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 ZDHHC13Q8IUH4 622 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 PARP8Q8N3A8 854 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 ZNF283Q8N7M2 679 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 ZNF454Q8N9F8 522 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 SPERTQ8NA61 448 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 ZNF511Q8NB15 262 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 OR51L1Q8NGJ5 315 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 UTP4Q969X6 686 aaKnown RBP11.29□□□□□ -0.6
CCDC13-209ENST00000496027 SLCO4A1Q96BD0 722 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 OTULINQ96BN8 352 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 SLAMF6Q96DU3 332 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 INTS14Q96SY0 518 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 WDR76Q9H967 626 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 NTN4Q9HB63 628 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 SLC25A19Q9HC21 320 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 PAPOLBQ9NRJ5 636 aaKnown RBP11.29□□□□□ -0.6
CCDC13-209ENST00000496027 CENPMQ9NSP4 180 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 TREM2Q9NZC2 230 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 KIF17Q9P2E2 1029 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 WIPI2Q9Y4P8 454 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 NPTNQ9Y639 398 aa11.29□□□□□ -0.6
CCDC13-209ENST00000496027 SONP18583 2426 aaKnown RBP11.28□□□□□ -0.6
CCDC13-209ENST00000496027 LRRC30A6NM36 301 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 XRCC2O43543 280 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 GMDSO60547 372 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 SRD5A1P18405 259 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 IL2RGP31785 369 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 SLC6A9P48067 706 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 CRISP1P54107 249 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 RAD23AP54725 363 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 GK2Q14410 553 aaPredicted RBP11.28□□□□□ -0.6
CCDC13-209ENST00000496027 ATP6AP1Q15904 470 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 ZNF181Q2M3W8 571 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 TMEM255AQ5JRV8 349 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 LINC01590Q5TEZ4 76 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 FAHD1Q6P587 224 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 Q6ZR03 302 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 MRPL21Q7Z2W9 205 aaKnown RBP11.28□□□□□ -0.6
CCDC13-209ENST00000496027 NAA40Q86UY6 237 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.28□□□□□ -0.6
CCDC13-209ENST00000496027 C1orf87Q8N0U7 546 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 KLHL36Q8N4N3 616 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 PLPP7Q8NBV4 271 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 OR52H1Q8NGJ2 320 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 ST7LQ8TDW4 575 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 SPRYD4Q8WW59 207 aaPredicted RBP11.28□□□□□ -0.6
CCDC13-209ENST00000496027 ZNRF4Q8WWF5 429 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 GTF3AQ92664 365 aaKnown RBP11.28□□□□□ -0.6
CCDC13-209ENST00000496027 TMEM186Q96B77 213 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 COPS4Q9BT78 406 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 REPIN1Q9BWE0 567 aaKnown RBP11.28□□□□□ -0.6
CCDC13-209ENST00000496027 POFUT1Q9H488 388 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 ZNF665Q9H7R5 613 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 NIPAL2Q9H841 368 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 TMEM106BQ9NUM4 274 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 PCDHB10Q9UN67 800 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 ABCA2Q9BZC7 2435 aa11.28□□□□□ -0.6
CCDC13-209ENST00000496027 TIPRLO75663 272 aa11.27□□□□□ -0.61
CCDC13-209ENST00000496027 GYPBP06028 91 aa11.27□□□□□ -0.61
CCDC13-209ENST00000496027 IGFBP5P24593 272 aa11.27□□□□□ -0.61
CCDC13-209ENST00000496027 HSD11B1P28845 292 aa11.27□□□□□ -0.61
CCDC13-209ENST00000496027 CCNIQ14094 377 aa11.27□□□□□ -0.61
CCDC13-209ENST00000496027 EIF2B1Q14232 305 aaKnown RBP11.27□□□□□ -0.61
CCDC13-209ENST00000496027 CR1LQ2VPA4 569 aa11.27□□□□□ -0.61
CCDC13-209ENST00000496027 TMEM155Q4W5P6 130 aa11.27□□□□□ -0.61
CCDC13-209ENST00000496027 DPY19L4Q7Z388 723 aa11.27□□□□□ -0.61
CCDC13-209ENST00000496027 LRRC28Q86X40 367 aaPredicted RBP11.27□□□□□ -0.61
CCDC13-209ENST00000496027 CPOQ8IVL8 374 aa11.27□□□□□ -0.61
CCDC13-209ENST00000496027 MUC20Q8N307 709 aaPredicted RBP11.27□□□□□ -0.61
CCDC13-209ENST00000496027 SPICQ8N5J4 248 aa11.27□□□□□ -0.61
CCDC13-209ENST00000496027 RNF133Q8WVZ7 376 aa11.27□□□□□ -0.61
CCDC13-209ENST00000496027 OR2V2Q96R30 315 aa11.27□□□□□ -0.61
CCDC13-209ENST00000496027 GAL3ST1Q99999 423 aa11.27□□□□□ -0.61
CCDC13-209ENST00000496027 SOX7Q9BT81 388 aa11.27□□□□□ -0.61
CCDC13-209ENST00000496027 OR51V1Q9H2C8 321 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms