RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 C10orf71Q711Q0 1435 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 GAKO14976 1311 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 A0A1B0GVI7 797 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 PRMT5O14744 637 aaPredicted RBP3.31□□□□□ -1.88
GTF3A-208ENST00000493903 ZMPSTE24O75844 475 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 SRP72O76094 671 aaKnown RBP3.31□□□□□ -1.88
GTF3A-208ENST00000493903 AIFM1O95831 613 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 HPRT1P00492 218 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 CST4P01036 141 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 GKN3PP0CG01 181 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 RIPPLY3P57055 190 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 KRTAP10-9P60411 292 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 NUTF2P61970 127 aaKnown RBP3.31□□□□□ -1.88
GTF3A-208ENST00000493903 MXD1Q05195 221 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 LRRC63Q05C16 580 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 STX3Q13277 289 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 AQP6Q13520 282 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 ATP6V1FQ16864 119 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 KCTD19Q17RG1 926 aaPredicted RBP3.31□□□□□ -1.88
GTF3A-208ENST00000493903 CCNJQ5T5M9 372 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 C6orf89Q6UWU4 347 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 PAMR1Q6UXH9 720 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 NPSR1Q6W5P4 371 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 H2AFVQ71UI9 128 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 UNC93AQ86WB7 457 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 ZNF677Q86XU0 584 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 CD302Q8IX05 232 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.31□□□□□ -1.88
GTF3A-208ENST00000493903 KLHL30-AS1Q8NEE0 82 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 OR4F15Q8NGB8 312 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 OR2G3Q8NGZ4 309 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 BAALCQ8WXS3 180 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 RPEQ96AT9 228 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 FAM122AQ96E09 287 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 ZNF317Q96PQ6 595 aaPredicted RBP3.31□□□□□ -1.88
GTF3A-208ENST00000493903 AGMATQ9BSE5 352 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 ULBP2Q9BZM5 246 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 RPF2Q9H7B2 306 aaKnown RBP3.31□□□□□ -1.88
GTF3A-208ENST00000493903 ANKHQ9HCJ1 492 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 STX18Q9P2W9 335 aaKnown RBP3.31□□□□□ -1.88
GTF3A-208ENST00000493903 NOTCH4Q99466 2003 aa3.31□□□□□ -1.88
GTF3A-208ENST00000493903 BRCA1P38398 1863 aaKnown RBP3.3□□□□□ -1.88
GTF3A-208ENST00000493903 MAP2P11137 1827 aaKnown RBP3.3□□□□□ -1.88
GTF3A-208ENST00000493903 PKD1L3Q7Z443 1732 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 KTN1Q86UP2 1357 aaKnown RBP3.3□□□□□ -1.88
GTF3A-208ENST00000493903 PSMB11A5LHX3 300 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 HACD1B0YJ81 288 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 K7EMT4 169 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 PI15O43692 258 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 OXTP01178 125 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 CSF3P09919 207 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 ICAM2P13598 275 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 PSMC3P17980 439 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 RAB5AP20339 215 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 F2RP25116 425 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 IL12BP29460 328 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 TFDP2Q14188 446 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 KIAA0087Q14695 138 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 SLC1A5Q15758 541 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 ZBED5Q49AG3 693 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 PAGE3Q5JUK9 113 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 ATAD3CQ5T2N8 411 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 ANKRD22Q5VYY1 191 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 HORMAD1Q86X24 394 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 CBLN2Q8IUK8 224 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 LRRC8AQ8IWT6 810 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 ZNF525Q8N782 197 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 DUSP18Q8NEJ0 188 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 OR10G9Q8NGN4 311 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 C7orf33Q8WU49 177 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 CCDC12Q8WUD4 166 aaPredicted RBP3.3□□□□□ -1.88
GTF3A-208ENST00000493903 TMEM239Q8WW34 195 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 OR8D1Q8WZ84 308 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 NDRG1Q92597 394 aaKnown RBP3.3□□□□□ -1.88
GTF3A-208ENST00000493903 ARPC1AQ92747 370 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 UCN3Q969E3 161 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 CENPNQ96H22 339 aaPredicted RBP3.3□□□□□ -1.88
GTF3A-208ENST00000493903 UBE2ZQ9H832 354 aaPredicted RBP3.3□□□□□ -1.88
GTF3A-208ENST00000493903 UGT1A7Q9HAW7 530 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 UGT1A8Q9HAW9 530 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 KCNJ16Q9NPI9 418 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 MDFICQ9P1T7 246 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 GGA2Q9UJY4 613 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 NEUROG3Q9Y4Z2 214 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 V9GYY9 64 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 THSD7BQ9C0I4 1608 aa3.3□□□□□ -1.88
GTF3A-208ENST00000493903 KIF26BQ2KJY2 2108 aa3.29□□□□□ -1.88
GTF3A-208ENST00000493903 NSD3Q9BZ95 1437 aa3.29□□□□□ -1.88
GTF3A-208ENST00000493903 TCF20Q9UGU0 1960 aaKnown RBP3.29□□□□□ -1.88
GTF3A-208ENST00000493903 PALLDQ8WX93 1383 aa3.29□□□□□ -1.88
GTF3A-208ENST00000493903 EVC2Q86UK5 1308 aa3.29□□□□□ -1.88
GTF3A-208ENST00000493903 A0A1W2PQ72 361 aa3.29□□□□□ -1.88
GTF3A-208ENST00000493903 H3BNH8 94 aa3.29□□□□□ -1.88
GTF3A-208ENST00000493903 CDK14O94921 469 aa3.29□□□□□ -1.88
GTF3A-208ENST00000493903 UTS2O95399 124 aa3.29□□□□□ -1.88
GTF3A-208ENST00000493903 FADS2O95864 444 aaKnown RBP3.29□□□□□ -1.88
GTF3A-208ENST00000493903 CATP04040 527 aaKnown RBP3.29□□□□□ -1.88
GTF3A-208ENST00000493903 RPN2P04844 631 aa3.29□□□□□ -1.88
GTF3A-208ENST00000493903 RHOCP08134 193 aa3.29□□□□□ -1.88
GTF3A-208ENST00000493903 NQO2P16083 231 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms