RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 REEP1Q9H902 201 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 CYB5R1Q9UHQ9 305 aa9.01□□□□□ -0.97
COL6A3-214ENST00000493608 PRPF19Q9UMS4 504 aaKnown RBP9.01□□□□□ -0.97
COL6A3-214ENST00000493608 DOCK11Q5JSL3 2073 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 ACOT8O14734 319 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 ZNF205O95201 554 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 CST1P01037 141 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 IGHV2-5P01817 119 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 CD55P08174 381 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 ACSM4P0C7M7 580 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 CLUP10909 449 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 RAC2P15153 192 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 ZNF823P16415 610 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 FSTP19883 344 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 TUBG1P23258 451 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 TNFSF4P23510 183 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 GGT2P36268 569 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 RGS6P49758 472 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 CRMP1Q14194 572 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 KRTAP24-1Q3LI83 254 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 ZMAT1Q5H9K5 638 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 RPL13AP3Q6NVV1 102 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 PGM2L1Q6PCE3 622 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 TRPM8Q7Z2W7 1104 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 TMEM179BQ7Z7N9 219 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 ADGRG5Q8IZF4 528 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 OR10AD1Q8NGE0 317 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 OR5L1Q8NGL2 311 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 OR10S1Q8NGN2 331 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 SPATA3Q8NHX4 192 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 ZNF420Q8TAQ5 688 aaPredicted RBP9□□□□□ -0.97
COL6A3-214ENST00000493608 BCAS4Q8TDM0 211 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 CANT1Q8WVQ1 401 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 ASB9Q96DX5 294 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 MAP6Q96JE9 813 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 COG8Q96MW5 612 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 OR2V2Q96R30 315 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 DIRC2Q96SL1 478 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 ATF6BQ99941 703 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 MED20Q9H944 212 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 PNRC2Q9NPJ4 139 aaKnown RBP9□□□□□ -0.97
COL6A3-214ENST00000493608 TUBG2Q9NRH3 451 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 TMEM106BQ9NUM4 274 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 FAM53CQ9NYF3 392 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 CGGBP1Q9UFW8 167 aaPredicted RBP9□□□□□ -0.97
COL6A3-214ENST00000493608 N6AMT1Q9Y5N5 214 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 NPTNQ9Y639 398 aa9□□□□□ -0.97
COL6A3-214ENST00000493608 C5orf63A6NC05 138 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.99□□□□□ -0.97
COL6A3-214ENST00000493608 GNGT2O14610 69 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 LCATP04180 440 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 HLA-DPB1P04440 258 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 RAP2AP10114 183 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 ANPEPP15144 967 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 TNFRSF1AP19438 455 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 ANOS1P23352 680 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 LCN2P80188 198 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 SLC3A1Q07837 685 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 TRAP1Q12931 704 aaKnown RBP8.99□□□□□ -0.97
COL6A3-214ENST00000493608 FBXW12Q6X9E4 464 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 SPATC1Q76KD6 591 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 PEG10Q86TG7 708 aaKnown RBP8.99□□□□□ -0.97
COL6A3-214ENST00000493608 LNX2Q8N448 690 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 IQCF1Q8N6M8 205 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 OR8G5Q8NG78 346 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 OR10G2Q8NGC3 310 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 OR2T4Q8NH00 348 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 GIPC3Q8TF64 312 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 SLCO4A1Q96BD0 722 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 OTULINQ96BN8 352 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 RAB39BQ96DA2 213 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 ZNF582Q96NG8 517 aaPredicted RBP8.99□□□□□ -0.97
COL6A3-214ENST00000493608 FEVQ99581 238 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 C1QTNF5Q9BXJ0 243 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 DGCR6LQ9BY27 220 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 C1orf21Q9H246 121 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 METTL17Q9H7H0 456 aaPredicted RBP8.99□□□□□ -0.97
COL6A3-214ENST00000493608 IL19Q9UHD0 177 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 ATPIF1Q9UII2 106 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 PPP1R3CQ9UQK1 317 aa8.99□□□□□ -0.97
COL6A3-214ENST00000493608 DNHD1Q96M86 4753 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 LOC105371242A0A075B767 164 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 TRAV20A0A0B4J274 112 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 FAM183AA6NL82 134 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 F5H5P2 479 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 H3BN98 237 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 ZNF593O00488 134 aaPredicted RBP8.98□□□□□ -0.97
COL6A3-214ENST00000493608 GYG2O15488 501 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 MLNRO43193 412 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 IGHV2-70P01814 119 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 RPLP1P05386 114 aaKnown RBP8.98□□□□□ -0.97
COL6A3-214ENST00000493608 SPARCP09486 303 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 SELEP16581 610 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 SPI1P17947 270 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 PCMT1P22061 227 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 PRKACGP22612 351 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 POU1F1P28069 291 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 FMO3P31513 532 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 PRKXP51817 358 aa8.98□□□□□ -0.97
COL6A3-214ENST00000493608 TPTEP56180 551 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms