RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 POLR1DQ9Y2S0 133 aa11.52□□□□□ -0.57
VARS-227ENST00000489979 FAM96BQ9Y3D0 163 aa11.52□□□□□ -0.57
VARS-227ENST00000489979 DNAH3Q8TD57 4116 aa11.52□□□□□ -0.57
VARS-227ENST00000489979 CDC42EP2O14613 210 aa11.51□□□□□ -0.57
VARS-227ENST00000489979 FCN3O75636 299 aa11.51□□□□□ -0.57
VARS-227ENST00000489979 TSPAN9O75954 239 aa11.51□□□□□ -0.57
VARS-227ENST00000489979 GPR4P46093 362 aa11.51□□□□□ -0.57
VARS-227ENST00000489979 KRR1Q13601 381 aaKnown RBP11.51□□□□□ -0.57
VARS-227ENST00000489979 CYLC2Q14093 348 aaPredicted RBP11.51□□□□□ -0.57
VARS-227ENST00000489979 GK2Q14410 553 aaPredicted RBP11.51□□□□□ -0.57
VARS-227ENST00000489979 OR8B8Q15620 311 aa11.51□□□□□ -0.57
VARS-227ENST00000489979 RSPO1Q2MKA7 263 aaPredicted RBP11.51□□□□□ -0.57
VARS-227ENST00000489979 LRRC23Q53EV4 343 aaPredicted RBP11.51□□□□□ -0.57
VARS-227ENST00000489979 COLCA1Q6ZS62 124 aa11.51□□□□□ -0.57
VARS-227ENST00000489979 BTN2A1Q7KYR7 527 aa11.51□□□□□ -0.57
VARS-227ENST00000489979 FAM156AQ8NDB6 213 aa11.51□□□□□ -0.57
VARS-227ENST00000489979 GJC3Q8NFK1 279 aa11.51□□□□□ -0.57
VARS-227ENST00000489979 TSPEARQ8WU66 669 aa11.51□□□□□ -0.57
VARS-227ENST00000489979 HDHD2Q9H0R4 259 aa11.51□□□□□ -0.57
VARS-227ENST00000489979 SEMA6AQ9H2E6 1030 aa11.51□□□□□ -0.57
VARS-227ENST00000489979 FN3KRPQ9HA64 309 aa11.51□□□□□ -0.57
VARS-227ENST00000489979 RPS6KA6Q9UK32 745 aa11.51□□□□□ -0.57
VARS-227ENST00000489979 NOTCH3Q9UM47 2321 aa11.51□□□□□ -0.57
VARS-227ENST00000489979 TRAV38-1A0A0B4J264 116 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 BTBD17A6NE02 478 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 J3KTA2 159 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 OR10H3O60404 316 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 GYPAP02724 150 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 OPN1MWP04001 364 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 OPN1MW2P0DN77 364 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 OPN1MW3P0DN78 364 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 HIST1H3AP68431 136 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 TRAM2Q15035 370 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 OR8G1Q15617 311 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 KCNMB1Q16558 191 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 MEP1BQ16820 701 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 ZBED5Q49AG3 693 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 HIST2H3PS2Q5TEC6 136 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 ERICH5Q6P6B1 374 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 CORO6Q6QEF8 472 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 TBPL2Q6SJ96 375 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 ZNF730Q6ZMV8 503 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 HIST2H3AQ71DI3 136 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 VMO1Q7Z5L0 202 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 OFCC1Q8IZS5 231 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 SPRYD4Q8WW59 207 aaPredicted RBP11.5□□□□□ -0.57
VARS-227ENST00000489979 SH3GL1Q99961 368 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 FNDC11Q9BVV2 318 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 NUAK2Q9H093 628 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 CNTD2Q9H8S5 307 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 NMNAT1Q9HAN9 279 aaPredicted RBP11.5□□□□□ -0.57
VARS-227ENST00000489979 VSX1Q9NZR4 365 aaPredicted RBP11.5□□□□□ -0.57
VARS-227ENST00000489979 VPREB3Q9UKI3 123 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 SNX13Q9Y5W8 968 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 LHFPL6Q9Y693 200 aa11.5□□□□□ -0.57
VARS-227ENST00000489979 A0A087WUU8 490 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 OOEPA6NGQ2 149 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 F5H5K5 113 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 DVL1O14640 695 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 NDUFA2O43678 99 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 ECDO95905 644 aaPredicted RBP11.49□□□□□ -0.57
VARS-227ENST00000489979 FBP1P09467 338 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 ACSM4P0C7M7 580 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 CA6P23280 308 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 SDHAP31040 664 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 KDELR2P33947 212 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 TGFBR2P37173 567 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 CENPAP49450 140 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 SELENOWP63302 87 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 HERPUD1Q15011 391 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 KRTAP27-1Q3LI81 207 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 PTCHD4Q6ZW05 846 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 MBOAT2Q6ZWT7 520 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 PGAP1Q75T13 922 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 REC114Q7Z4M0 266 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 RNF113BQ8IZP6 322 aaKnown RBP11.49□□□□□ -0.57
VARS-227ENST00000489979 OR8J3Q8NGG0 315 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 MRAPQ8TCY5 172 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 ACOT11Q8WXI4 607 aaPredicted RBP11.49□□□□□ -0.57
VARS-227ENST00000489979 SLCO4A1Q96BD0 722 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 ZNF583Q96ND8 569 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 TRIM36Q9NQ86 728 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 ZNRD1Q9P1U0 126 aa11.49□□□□□ -0.57
VARS-227ENST00000489979 FXYD1O00168 92 aa11.48□□□□□ -0.57
VARS-227ENST00000489979 SOCS2O14508 198 aa11.48□□□□□ -0.57
VARS-227ENST00000489979 FFAR1O14842 300 aa11.48□□□□□ -0.57
VARS-227ENST00000489979 LCATP04180 440 aa11.48□□□□□ -0.57
VARS-227ENST00000489979 PRB3Q04118 309 aaPredicted RBP11.48□□□□□ -0.57
VARS-227ENST00000489979 POU4F2Q12837 409 aa11.48□□□□□ -0.57
VARS-227ENST00000489979 MALLQ13021 153 aa11.48□□□□□ -0.57
VARS-227ENST00000489979 CDONQ4KMG0 1287 aa11.48□□□□□ -0.57
VARS-227ENST00000489979 GPR139Q6DWJ6 353 aa11.48□□□□□ -0.57
VARS-227ENST00000489979 SLC35E4Q6ICL7 350 aa11.48□□□□□ -0.57
VARS-227ENST00000489979 Q6ZTK2 550 aa11.48□□□□□ -0.57
VARS-227ENST00000489979 TMPRSS11FQ6ZWK6 438 aa11.48□□□□□ -0.57
VARS-227ENST00000489979 VTCN1Q7Z7D3 282 aa11.48□□□□□ -0.57
VARS-227ENST00000489979 NAA40Q86UY6 237 aa11.48□□□□□ -0.57
VARS-227ENST00000489979 FGFRL1Q8N441 504 aa11.48□□□□□ -0.57
VARS-227ENST00000489979 GALNT4Q8N4A0 578 aa11.48□□□□□ -0.57
VARS-227ENST00000489979 ST8SIA4Q92187 359 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms