RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 THBDP07204 575 aa13.88□□□□□ -0.19
CLDN11-208ENST00000488989 CD36P16671 472 aa13.88□□□□□ -0.19
CLDN11-208ENST00000488989 GABRA5P31644 462 aa13.88□□□□□ -0.19
CLDN11-208ENST00000488989 TRAM1Q15629 374 aa13.88□□□□□ -0.19
CLDN11-208ENST00000488989 TBC1D28Q2M2D7 210 aa13.88□□□□□ -0.19
CLDN11-208ENST00000488989 NAA40Q86UY6 237 aa13.88□□□□□ -0.19
CLDN11-208ENST00000488989 BATF3Q9NR55 127 aa13.88□□□□□ -0.19
CLDN11-208ENST00000488989 NPAP1Q9NZP6 1156 aa13.88□□□□□ -0.19
CLDN11-208ENST00000488989 RALYQ9UKM9 306 aaKnown RBP13.88□□□□□ -0.19
CLDN11-208ENST00000488989 SLC22A13Q9Y226 551 aa13.88□□□□□ -0.19
CLDN11-208ENST00000488989 A0A0U1RQV5 110 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 PNMA8CA0A1B0GUJ8 204 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 C5orf49A4QMS7 147 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 J3QW42 95 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 CECR9P0C854 216 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 ZNF35P13682 527 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 GALP22466 123 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 ANOS1P23352 680 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 PSMA1P25786 263 aaKnown RBP13.87□□□□□ -0.19
CLDN11-208ENST00000488989 SLC3A1Q07837 685 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 BCL2L15Q5TBC7 163 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 CD200R1LQ6Q8B3 271 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 ZNF704Q6ZNC4 412 aaPredicted RBP13.87□□□□□ -0.19
CLDN11-208ENST00000488989 FAM57BQ71RH2 274 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 ANKRD13BQ86YJ7 626 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 MS4A15Q8N5U1 240 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 OR8B12Q8NGG6 310 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 OR52H1Q8NGJ2 320 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 OR5AK2Q8NH90 309 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 GHSRQ92847 366 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 PPP1R14AQ96A00 147 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 WFIKKN1Q96NZ8 548 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 PDCD1LG2Q9BQ51 273 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 FUNDC2Q9BWH2 189 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 TBCCD1Q9NVR7 557 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 ZNF319Q9P2F9 582 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 ZNF281Q9Y2X9 895 aa13.87□□□□□ -0.19
CLDN11-208ENST00000488989 DPPA5A6NC42 116 aa13.86□□□□□ -0.19
CLDN11-208ENST00000488989 A6NHS1 94 aa13.86□□□□□ -0.19
CLDN11-208ENST00000488989 SC5DO75845 299 aa13.86□□□□□ -0.19
CLDN11-208ENST00000488989 ANXA2P07355 339 aaKnown RBP13.86□□□□□ -0.19
CLDN11-208ENST00000488989 UBCP0CG48 685 aaKnown RBP13.86□□□□□ -0.19
CLDN11-208ENST00000488989 SLC2A1P11166 492 aa13.86□□□□□ -0.19
CLDN11-208ENST00000488989 EPXP11678 715 aa13.86□□□□□ -0.19
CLDN11-208ENST00000488989 CCL2P13500 99 aa13.86□□□□□ -0.19
CLDN11-208ENST00000488989 CCL1P22362 96 aa13.86□□□□□ -0.19
CLDN11-208ENST00000488989 GRNP28799 593 aaKnown RBP13.86□□□□□ -0.19
CLDN11-208ENST00000488989 PCSK6P29122 969 aa13.86□□□□□ -0.19
CLDN11-208ENST00000488989 WNT5AP41221 380 aa13.86□□□□□ -0.19
CLDN11-208ENST00000488989 SLC6A9P48067 706 aa13.86□□□□□ -0.19
CLDN11-208ENST00000488989 RPS11P62280 158 aaKnown RBP eCLIP13.86□□□□□ -0.19
CLDN11-208ENST00000488989 RPS25P62851 125 aaKnown RBP13.86□□□□□ -0.19
CLDN11-208ENST00000488989 YIF1BQ5BJH7 314 aa13.86□□□□□ -0.19
CLDN11-208ENST00000488989 TMEM244Q5VVB8 128 aa13.86□□□□□ -0.19
CLDN11-208ENST00000488989 Q6ZSR3 168 aa13.86□□□□□ -0.19
CLDN11-208ENST00000488989 PAQR4Q8N4S7 273 aaPredicted RBP13.86□□□□□ -0.19
CLDN11-208ENST00000488989 RGP1Q92546 391 aaPredicted RBP13.86□□□□□ -0.19
CLDN11-208ENST00000488989 PGAM5Q96HS1 289 aa13.86□□□□□ -0.19
CLDN11-208ENST00000488989 C1QTNF6Q9BXI9 259 aa13.86□□□□□ -0.19
CLDN11-208ENST00000488989 COMMD4Q9H0A8 199 aa13.86□□□□□ -0.19
CLDN11-208ENST00000488989 RBM38Q9H0Z9 239 aaKnown RBP13.86□□□□□ -0.19
CLDN11-208ENST00000488989 CDH20Q9HBT6 801 aa13.86□□□□□ -0.19
CLDN11-208ENST00000488989 BRD7Q9NPI1 651 aa13.86□□□□□ -0.19
CLDN11-208ENST00000488989 NPDC1Q9NQX5 325 aaPredicted RBP13.86□□□□□ -0.19
CLDN11-208ENST00000488989 NDUFA13Q9P0J0 144 aa13.86□□□□□ -0.19
CLDN11-208ENST00000488989 A0A1B0GTI1 187 aa13.85□□□□□ -0.19
CLDN11-208ENST00000488989 SMIM31A0A1B0GVY4 71 aa13.85□□□□□ -0.19
CLDN11-208ENST00000488989 C5orf63A6NC05 138 aa13.85□□□□□ -0.19
CLDN11-208ENST00000488989 LCATP04180 440 aa13.85□□□□□ -0.19
CLDN11-208ENST00000488989 ACHEP22303 614 aa13.85□□□□□ -0.19
CLDN11-208ENST00000488989 CRYBB2P43320 205 aa13.85□□□□□ -0.19
CLDN11-208ENST00000488989 NAAAQ02083 359 aa13.85□□□□□ -0.19
CLDN11-208ENST00000488989 SNAI3Q3KNW1 292 aa13.85□□□□□ -0.19
CLDN11-208ENST00000488989 UNQ9370/PRO34162Q6UXP9 181 aa13.85□□□□□ -0.19
CLDN11-208ENST00000488989 GDPGP1Q6ZNW5 385 aa13.85□□□□□ -0.19
CLDN11-208ENST00000488989 ZNF676Q8N7Q3 588 aa13.85□□□□□ -0.19
CLDN11-208ENST00000488989 PLPP7Q8NBV4 271 aa13.85□□□□□ -0.19
CLDN11-208ENST00000488989 SPSB4Q96A44 273 aa13.85□□□□□ -0.19
CLDN11-208ENST00000488989 APOBEC3DQ96AK3 386 aaPredicted RBP13.85□□□□□ -0.19
CLDN11-208ENST00000488989 OR10A2Q9H208 303 aa13.85□□□□□ -0.19
CLDN11-208ENST00000488989 NDRG3Q9UGV2 375 aa13.85□□□□□ -0.19
CLDN11-208ENST00000488989 ENPP5Q9UJA9 477 aa13.85□□□□□ -0.19
CLDN11-208ENST00000488989 ZNF391Q9UJN7 358 aa13.85□□□□□ -0.19
CLDN11-208ENST00000488989 STUB1Q9UNE7 303 aa13.85□□□□□ -0.19
CLDN11-208ENST00000488989 GTF2A1LQ9UNN4 478 aa13.85□□□□□ -0.19
CLDN11-208ENST00000488989 CEPT1Q9Y6K0 416 aa13.85□□□□□ -0.19
CLDN11-208ENST00000488989 IGHV2OR16-5A0A0B4J2B6 119 aa13.84□□□□□ -0.19
CLDN11-208ENST00000488989 TRBV5-5A0A0J9YX44 114 aa13.84□□□□□ -0.19
CLDN11-208ENST00000488989 TRDV1A0A1B0GX56 115 aa13.84□□□□□ -0.19
CLDN11-208ENST00000488989 H3BSA7 217 aa13.84□□□□□ -0.19
CLDN11-208ENST00000488989 GABARAPO95166 117 aa13.84□□□□□ -0.19
CLDN11-208ENST00000488989 HLA-DPB1P04440 258 aa13.84□□□□□ -0.19
CLDN11-208ENST00000488989 CCNOP22674 350 aa13.84□□□□□ -0.19
CLDN11-208ENST00000488989 GADD45AP24522 165 aa13.84□□□□□ -0.19
CLDN11-208ENST00000488989 PEX19P40855 299 aa13.84□□□□□ -0.19
CLDN11-208ENST00000488989 ZNF83P51522 516 aa13.84□□□□□ -0.19
CLDN11-208ENST00000488989 TIMM50Q3ZCQ8 353 aa13.84□□□□□ -0.19
CLDN11-208ENST00000488989 GPR107Q5VW38 600 aa13.84□□□□□ -0.19
CLDN11-208ENST00000488989 SLC16A12Q6ZSM3 486 aa13.84□□□□□ -0.19
CLDN11-208ENST00000488989 CCDC54Q8NEL0 328 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms