RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 CXorf36Q9H7Y0 433 aa3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 TPT1P8Q9HAU6 139 aa3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 ZDHHC4Q9NPG8 344 aa3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 MRPL17Q9NRX2 175 aaKnown RBP3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 GKN1Q9NS71 199 aa3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 TEX10Q9NXF1 929 aaPredicted RBP3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 FOXJ2Q9P0K8 574 aa3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 VPS29Q9UBQ0 182 aa3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 EPHA6Q9UF33 1036 aa3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 NPIPA1Q9UND3 350 aa3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 RNF6Q9Y252 685 aa3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 TRAPPC4Q9Y296 219 aa3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 PEX16Q9Y5Y5 336 aa3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 V9GYY9 64 aa3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 GOLGB1Q14789 3259 aaKnown RBP3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 PLXNA4Q9HCM2 1894 aa3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 ANKRD12Q6UB98 2062 aa3.56□□□□□ -1.84
PRPF38B-205ENST00000485810 TRGV11A0A075B6L2 103 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 RNF222A6NCQ9 220 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 A6NNC1 897 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 EFCAB9A8MZ26 197 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 LOC110117498-PIK3R3F6TDL0 507 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 SULT1C2O00338 296 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 BTN3A3O00478 584 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 BHLHE40O14503 412 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 TFECO14948 347 aaPredicted RBP3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 SGCEO43556 437 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 KIAA0513O60268 411 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 EIF1BO60739 113 aaKnown RBP3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 GCM2O75603 506 aaPredicted RBP3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 RFPL2O75678 378 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 SC5DO75845 299 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 GLSO94925 669 aaPredicted RBP3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 RCBTB2O95199 551 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 ZNF682O95780 498 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 WDPCPO95876 746 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 TXNDC12O95881 172 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 ACTL6AO96019 429 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 RAF1P04049 648 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 RPLP0P05388 317 aaKnown RBP3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 CSN3P07498 182 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 HCKP08631 526 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 NBEAP1P0C6P0 100 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 SMIM6P0DI80 62 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 TRAPPC2P0DI81 140 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 TRAPPC2BP0DI82 140 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 RNH1P13489 461 aaKnown RBP3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 PRF1P14222 555 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 ENGP17813 658 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 CSNK2A2P19784 350 aaPredicted RBP3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 IDSP22304 550 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 LHCGRP22888 699 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 GATA3P23771 443 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 PSMB9P28065 219 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 CD1CP29017 333 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 EPHA2P29317 976 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 TALDO1P37837 337 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 LIPAP38571 399 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 EIF1P41567 113 aaKnown RBP3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 MAP2K4P45985 399 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 XCR1P46094 333 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 GABRA4P48169 554 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 SPINT3P49223 89 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 MEOX2P50222 304 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 RAB13P51153 203 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 ARPP19P56211 112 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 SNRPD1P62314 119 aaKnown RBP3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 PPIAP62937 165 aaKnown RBP3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 FAM3AP98173 230 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 SEMG2Q02383 582 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 FOXF2Q12947 444 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 SELENBP1Q13228 472 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 CDH18Q13634 790 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 RGNQ15493 299 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 MICAQ29983 383 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 ZNF630Q2M218 657 aaPredicted RBP3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 ZNF658BQ4V348 819 aaPredicted RBP3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 ACSM3Q53FZ2 586 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 UTF1Q5T230 341 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 ZNF770Q6IQ21 691 aaPredicted RBP3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 BTNL3Q6UXE8 466 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 RBMS3Q6XE24 437 aaKnown RBP3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 ZNF367Q7RTV3 350 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 SLC16A14Q7RTX9 510 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 S100A7AQ86SG5 101 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 CCDC190Q86UF4 302 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 HAPLN4Q86UW8 402 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 NRMQ8IXM6 262 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 JAGN1Q8N5M9 183 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 GPR26Q8NDV2 337 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 SDR9C7Q8NEX9 313 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 OR10W1Q8NGF6 305 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 OR52L2PQ8NGH6 319 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 OR4D5Q8NGN0 318 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 MCFD2Q8NI22 146 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 TMEM163Q8TC26 289 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 NUDCD2Q8WVJ2 157 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 PIK3R3Q92569 461 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 PYCR2Q96C36 320 aa3.55□□□□□ -1.84
PRPF38B-205ENST00000485810 R3HDM4Q96D70 268 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms