RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 CBLN2Q8IUK8 224 aa2.43□□□□□ -2.02
SMC4-215ENST00000484799 ARHGAP18Q8N392 663 aa2.43□□□□□ -2.02
SMC4-215ENST00000484799 CSGALNACT2Q8N6G5 542 aa2.43□□□□□ -2.02
SMC4-215ENST00000484799 ASCC1Q8N9N2 400 aaKnown RBP2.43□□□□□ -2.02
SMC4-215ENST00000484799 SNX31Q8N9S9 440 aa2.43□□□□□ -2.02
SMC4-215ENST00000484799 Q8N9W7 124 aa2.43□□□□□ -2.02
SMC4-215ENST00000484799 MDS2Q8NDY4 140 aa2.43□□□□□ -2.02
SMC4-215ENST00000484799 OR51E1Q8TCB6 317 aa2.43□□□□□ -2.02
SMC4-215ENST00000484799 ZFP90Q8TF47 636 aa2.43□□□□□ -2.02
SMC4-215ENST00000484799 MRGPRFQ96AM1 343 aa2.43□□□□□ -2.02
SMC4-215ENST00000484799 FAM131CQ96AQ9 280 aa2.43□□□□□ -2.02
SMC4-215ENST00000484799 RPEQ96AT9 228 aa2.43□□□□□ -2.02
SMC4-215ENST00000484799 DCPSQ96C86 337 aaKnown RBP2.43□□□□□ -2.02
SMC4-215ENST00000484799 FOPNLQ96NB1 174 aa2.43□□□□□ -2.02
SMC4-215ENST00000484799 WFIKKN1Q96NZ8 548 aa2.43□□□□□ -2.02
SMC4-215ENST00000484799 SLC17A9Q9BYT1 436 aa2.43□□□□□ -2.02
SMC4-215ENST00000484799 IFI27L2Q9H2X8 130 aa2.43□□□□□ -2.02
SMC4-215ENST00000484799 CDC42EP4Q9H3Q1 356 aaKnown RBP2.43□□□□□ -2.02
SMC4-215ENST00000484799 ARMC7Q9H6L4 198 aa2.43□□□□□ -2.02
SMC4-215ENST00000484799 KIR3DX1Q9H7L2 352 aa2.43□□□□□ -2.02
SMC4-215ENST00000484799 PRSS16Q9NQE7 514 aa2.43□□□□□ -2.02
SMC4-215ENST00000484799 SLC39A1Q9NY26 324 aa2.43□□□□□ -2.02
SMC4-215ENST00000484799 DENND4AQ7Z401 1863 aa2.43□□□□□ -2.02
SMC4-215ENST00000484799 IGLV1-36A0A0B4J1U3 117 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 IGHV3-66A0A0C4DH42 116 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 NCBP2LA6PVI3 153 aaKnown RBP2.42□□□□□ -2.02
SMC4-215ENST00000484799 SYCE1LA8MT33 242 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 PDZK1P1A8MUH7 402 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 E7EWF7 191 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 PSMD11O00231 422 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 SS18L1O75177 396 aaPredicted RBP2.42□□□□□ -2.02
SMC4-215ENST00000484799 TDP2O95551 362 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 HLA-DPB1P04440 258 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 GLAP06280 429 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 USF1P22415 310 aaPredicted RBP2.42□□□□□ -2.02
SMC4-215ENST00000484799 IL32P24001 234 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 IVDP26440 423 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 CFHR2P36980 270 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 HCAR3P49019 387 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 FABP6P51161 128 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 ZNF138P52744 262 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 PPP1CBP62140 327 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 PRR3P79522 188 aaKnown RBP2.42□□□□□ -2.02
SMC4-215ENST00000484799 ERCC8Q13216 396 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 EIF4EBP1Q13541 118 aaPredicted RBP2.42□□□□□ -2.02
SMC4-215ENST00000484799 STK11Q15831 433 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 ZNF829Q3KNS6 432 aaPredicted RBP2.42□□□□□ -2.02
SMC4-215ENST00000484799 ARL9Q6T311 187 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 LINC00336Q6ZUF6 198 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 PCP2Q8IVA1 136 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 TRAM1L1Q8N609 369 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 DUSP18Q8NEJ0 188 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 OR6K6Q8NGW6 343 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 RNF185Q96GF1 192 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 TAAR1Q96RJ0 339 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 AGMATQ9BSE5 352 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 OR2AG1Q9H205 316 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 MED4Q9NPJ6 270 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 ADA2Q9NZK5 511 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 CTSFQ9UBX1 484 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 PSG8Q9UQ74 426 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 KPTNQ9Y664 436 aa2.42□□□□□ -2.02
SMC4-215ENST00000484799 ZNFX1Q9P2E3 1918 aaKnown RBP2.42□□□□□ -2.02
SMC4-215ENST00000484799 SBNO1A3KN83 1393 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 IGHV3OR16-9A0A0B4J2B5 98 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 LOC100506127A0A0U1RQW1 187 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 LOC100653049A0A140TA62 436 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 HACD1B0YJ81 288 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 ANKRD65E5RJM6 399 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 SLC19A2O60779 497 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 KRT34O76011 436 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 SLC25A14O95258 325 aaPredicted RBP2.41□□□□□ -2.02
SMC4-215ENST00000484799 PCCAP05165 728 aaPredicted RBP2.41□□□□□ -2.02
SMC4-215ENST00000484799 EIF4EP06730 217 aaKnown RBP2.41□□□□□ -2.02
SMC4-215ENST00000484799 ZNF823P16415 610 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 HTR1DP28221 377 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 HOXA9P31269 272 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 PMELP40967 661 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 CSNK1A1P48729 337 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 LHX2P50458 406 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 CRISP3P54108 245 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 SLC39A6Q13433 755 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 GABRA6Q16445 453 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 Q3ZCU0 254 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 LIN9Q5TKA1 542 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 METTL21CQ5VZV1 264 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 C12orf54Q6X4T0 127 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 ST13P4Q8IZP2 240 aaPredicted RBP2.41□□□□□ -2.02
SMC4-215ENST00000484799 KIF2BQ8N4N8 673 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 METTL13Q8N6R0 699 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 LINC00469Q8N7U9 141 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 TCP10LQ8TDR4 215 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 ABHD3Q8WU67 409 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 ZNF681Q96N22 645 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 COL21A1Q96P44 957 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 HDHD3Q9BSH5 251 aaPredicted RBP2.41□□□□□ -2.02
SMC4-215ENST00000484799 UBE2ZQ9H832 354 aaPredicted RBP2.41□□□□□ -2.02
SMC4-215ENST00000484799 NECAP2Q9NVZ3 263 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 OR12D3Q9UGF7 316 aa2.41□□□□□ -2.02
SMC4-215ENST00000484799 ARHGAP21Q5T5U3 1957 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms