RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 CT45A3Q8NHU0 189 aa1.04□□□□□ -2.24
KDM1A-204ENST00000481879 KLF14Q8TD94 323 aaPredicted RBP1.04□□□□□ -2.24
KDM1A-204ENST00000481879 ELMO1Q92556 727 aa1.04□□□□□ -2.24
KDM1A-204ENST00000481879 GHSRQ92847 366 aa1.04□□□□□ -2.24
KDM1A-204ENST00000481879 DNAJC1Q96KC8 554 aaKnown RBP1.04□□□□□ -2.24
KDM1A-204ENST00000481879 IP6K3Q96PC2 410 aa1.04□□□□□ -2.24
KDM1A-204ENST00000481879 CENPKQ9BS16 269 aa1.04□□□□□ -2.24
KDM1A-204ENST00000481879 MARVELD1Q9BSK0 173 aa1.04□□□□□ -2.24
KDM1A-204ENST00000481879 TMEM243Q9BU79 118 aa1.04□□□□□ -2.24
KDM1A-204ENST00000481879 BEX1Q9HBH7 125 aa1.04□□□□□ -2.24
KDM1A-204ENST00000481879 TMEM27Q9HBJ8 222 aa1.04□□□□□ -2.24
KDM1A-204ENST00000481879 EXOSC4Q9NPD3 245 aaKnown RBP1.04□□□□□ -2.24
KDM1A-204ENST00000481879 MTCH1Q9NZJ7 389 aa1.04□□□□□ -2.24
KDM1A-204ENST00000481879 CCDC59Q9P031 241 aaKnown RBP1.04□□□□□ -2.24
KDM1A-204ENST00000481879 COX16Q9P0S2 106 aa1.04□□□□□ -2.24
KDM1A-204ENST00000481879 SLC17A7Q9P2U7 560 aa1.04□□□□□ -2.24
KDM1A-204ENST00000481879 EXTL2Q9UBQ6 330 aa1.04□□□□□ -2.24
KDM1A-204ENST00000481879 LGALS13Q9UHV8 139 aa1.04□□□□□ -2.24
KDM1A-204ENST00000481879 PITPNC1Q9UKF7 332 aa1.04□□□□□ -2.24
KDM1A-204ENST00000481879 UBIAD1Q9Y5Z9 338 aa1.04□□□□□ -2.24
KDM1A-204ENST00000481879 NID2Q14112 1375 aa1.04□□□□□ -2.24
KDM1A-204ENST00000481879 SDK2Q58EX2 2172 aa1.04□□□□□ -2.24
KDM1A-204ENST00000481879 CAMTA1Q9Y6Y1 1673 aa1.04□□□□□ -2.24
KDM1A-204ENST00000481879 FRMPD3Q5JV73 1810 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 NLRC5Q86WI3 1866 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 A0A0J9YXV3 536 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 XKRY2A2RUG3 117 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 CEACAM18A8MTB9 384 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 SIRPB1O00241 398 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 LSM1O15116 133 aaKnown RBP1.03□□□□□ -2.24
KDM1A-204ENST00000481879 RNF13O43567 381 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 CDC40O60508 579 aaKnown RBP eCLIP1.03□□□□□ -2.24
KDM1A-204ENST00000481879 EIF4E2O60573 245 aaKnown RBP1.03□□□□□ -2.24
KDM1A-204ENST00000481879 CLDN11O75508 207 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 CNMDO75829 334 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 AQP8O94778 261 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 CYB5R3P00387 301 aaPredicted RBP1.03□□□□□ -2.24
KDM1A-204ENST00000481879 PAHP00439 452 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 RRM2P31350 389 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 CD70P32970 193 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 BMI1P35226 326 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 TALDO1P37837 337 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 SYKP43405 635 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 RAB10P61026 200 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 RPS11P62280 158 aaKnown RBP eCLIP1.03□□□□□ -2.24
KDM1A-204ENST00000481879 TRAM2Q15035 370 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 NCF4Q15080 339 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 CEP55Q53EZ4 464 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 HSP90AB3PQ58FF7 597 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 C22orf42Q6IC83 251 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 DEGS2Q6QHC5 323 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 C16orf47Q6ZP98 133 aaPredicted RBP1.03□□□□□ -2.24
KDM1A-204ENST00000481879 CBR4Q8N4T8 237 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 SLC35G3Q8N808 338 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 SNX31Q8N9S9 440 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 APCDD1LQ8NCL9 501 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 OR56B2PQ8NGI1 322 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 OR4A4PQ8NGN8 299 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 SLC2A14Q8TDB8 520 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 ACMSDQ8TDX5 336 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 KCNS1Q96KK3 526 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 RNF145Q96MT1 663 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 CHCHD7Q9BUK0 85 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 NUP58Q9BVL2 599 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 FRMD8P1Q9BZ68 369 aaPredicted RBP1.03□□□□□ -2.24
KDM1A-204ENST00000481879 TMEM38AQ9H6F2 299 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 MYOZ1Q9NP98 299 aaPredicted RBP1.03□□□□□ -2.24
KDM1A-204ENST00000481879 AGPAT4Q9NRZ5 378 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 COMMD3-BMI1R4GMX3 469 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 USP47Q96K76 1375 aa1.03□□□□□ -2.24
KDM1A-204ENST00000481879 TRBV9A0A0B4J1U6 114 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 SYCE1LA8MT33 242 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 PDZK1P1A8MUH7 402 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 SLC9A3R1O14745 358 aaPredicted RBP1.02□□□□□ -2.25
KDM1A-204ENST00000481879 PLIN3O60664 434 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 EIF1BO60739 113 aaKnown RBP1.02□□□□□ -2.25
KDM1A-204ENST00000481879 LHBP01229 141 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 TROVE2P10155 538 aaKnown RBP eCLIP1.02□□□□□ -2.25
KDM1A-204ENST00000481879 CD28P10747 220 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 LGALS3P17931 250 aaKnown RBP1.02□□□□□ -2.25
KDM1A-204ENST00000481879 IL32P24001 234 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 EIF1P41567 113 aaKnown RBP1.02□□□□□ -2.25
KDM1A-204ENST00000481879 ELF3P78545 371 aaPredicted RBP1.02□□□□□ -2.25
KDM1A-204ENST00000481879 ART3Q13508 389 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 PGGHGQ32M88 737 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 ALKBH6Q3KRA9 238 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 TPTE2P1Q5T6R2 138 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 C1orf185Q5T7R7 199 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 FAM222AQ5U5X8 452 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 NANOGNBQ7Z5D8 188 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 CMC1Q7Z7K0 106 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 STK40Q8N2I9 435 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 GTPBP8Q8N3Z3 284 aaPredicted RBP1.02□□□□□ -2.25
KDM1A-204ENST00000481879 ZNF680Q8NEM1 530 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 OR7G2Q8NG99 324 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 OR4M1Q8NGD0 313 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 OR10G6Q8NH81 332 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 OR5K2Q8NHB8 316 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 LYPD6BQ8NI32 183 aa1.02□□□□□ -2.25
KDM1A-204ENST00000481879 RAB3IL1Q8TBN0 382 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms