RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 HLA-DPB1P04440 258 aa15.27■□□□□ 0.04
UPF3A-206ENST00000480362 CCL2P13500 99 aa15.27■□□□□ 0.04
UPF3A-206ENST00000480362 ZNF14P17017 642 aaPredicted RBP15.27■□□□□ 0.04
UPF3A-206ENST00000480362 CCNOP22674 350 aa15.27■□□□□ 0.04
UPF3A-206ENST00000480362 APLNRP35414 380 aa15.27■□□□□ 0.04
UPF3A-206ENST00000480362 UGT2B10P36537 528 aa15.27■□□□□ 0.04
UPF3A-206ENST00000480362 HGFACQ04756 655 aa15.27■□□□□ 0.04
UPF3A-206ENST00000480362 CTF1Q16619 201 aa15.27■□□□□ 0.04
UPF3A-206ENST00000480362 CD200R1LQ6Q8B3 271 aa15.27■□□□□ 0.04
UPF3A-206ENST00000480362 ZNF704Q6ZNC4 412 aaPredicted RBP15.27■□□□□ 0.04
UPF3A-206ENST00000480362 GDPGP1Q6ZNW5 385 aa15.27■□□□□ 0.04
UPF3A-206ENST00000480362 OR8B12Q8NGG6 310 aa15.27■□□□□ 0.04
UPF3A-206ENST00000480362 OR13C5Q8NGS8 318 aa15.27■□□□□ 0.04
UPF3A-206ENST00000480362 RAB2BQ8WUD1 216 aa15.27■□□□□ 0.04
UPF3A-206ENST00000480362 RGP1Q92546 391 aaPredicted RBP15.27■□□□□ 0.04
UPF3A-206ENST00000480362 C12orf43Q96C57 262 aaKnown RBP15.27■□□□□ 0.04
UPF3A-206ENST00000480362 TRMT61AQ96FX7 289 aaKnown RBP15.27■□□□□ 0.04
UPF3A-206ENST00000480362 DCLRE1CQ96SD1 692 aaKnown RBP15.27■□□□□ 0.04
UPF3A-206ENST00000480362 ZNF319Q9P2F9 582 aa15.27■□□□□ 0.04
UPF3A-206ENST00000480362 NBEAQ8NFP9 2946 aa15.27■□□□□ 0.03
UPF3A-206ENST00000480362 KMT2BQ9UMN6 2715 aaPredicted RBP15.26■□□□□ 0.03
UPF3A-206ENST00000480362 C5orf49A4QMS7 147 aa15.26■□□□□ 0.03
UPF3A-206ENST00000480362 C5orf63A6NC05 138 aa15.26■□□□□ 0.03
UPF3A-206ENST00000480362 GABRPO00591 440 aa15.26■□□□□ 0.03
UPF3A-206ENST00000480362 TTRP02766 147 aa15.26■□□□□ 0.03
UPF3A-206ENST00000480362 LCATP04180 440 aa15.26■□□□□ 0.03
UPF3A-206ENST00000480362 CELA3BP08861 270 aa15.26■□□□□ 0.03
UPF3A-206ENST00000480362 ANOS1P23352 680 aa15.26■□□□□ 0.03
UPF3A-206ENST00000480362 IDH3GP51553 393 aaPredicted RBP15.26■□□□□ 0.03
UPF3A-206ENST00000480362 RPS11P62280 158 aaKnown RBP eCLIP15.26■□□□□ 0.03
UPF3A-206ENST00000480362 INSL4Q14641 139 aa15.26■□□□□ 0.03
UPF3A-206ENST00000480362 ACSM3Q53FZ2 586 aa15.26■□□□□ 0.03
UPF3A-206ENST00000480362 YIF1BQ5BJH7 314 aa15.26■□□□□ 0.03
UPF3A-206ENST00000480362 TMEM91Q6ZNR0 172 aa15.26■□□□□ 0.03
UPF3A-206ENST00000480362 SLC30A7Q8NEW0 376 aa15.26■□□□□ 0.03
UPF3A-206ENST00000480362 MUCL1Q96DR8 90 aa15.26■□□□□ 0.03
UPF3A-206ENST00000480362 USB1Q9BQ65 265 aaKnown RBP15.26■□□□□ 0.03
UPF3A-206ENST00000480362 CENPOQ9BU64 300 aa15.26■□□□□ 0.03
UPF3A-206ENST00000480362 RNF167Q9H6Y7 350 aa15.26■□□□□ 0.03
UPF3A-206ENST00000480362 SP140LQ9H930 580 aa15.26■□□□□ 0.03
UPF3A-206ENST00000480362 TXNL4BQ9NX01 149 aaKnown RBP15.26■□□□□ 0.03
UPF3A-206ENST00000480362 NKX2-6A6NCS4 301 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 H3BMQ9 156 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 H3BSH0 61 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 ZNF701M0R085 212 aaPredicted RBP15.25■□□□□ 0.03
UPF3A-206ENST00000480362 P2RY10O00398 339 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 TBX1O43435 398 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 SERPINA3P01011 423 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 IGKV3-15P01624 115 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 ISG15P05161 165 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 GALP22466 123 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 CCKARP32238 428 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 VBP1P61758 197 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 NCS1P62166 190 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 PPA1Q15181 289 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 CDSNQ15517 529 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 TAB1Q15750 504 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 TMEM244Q5VVB8 128 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 CEACAM19Q7Z692 300 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 MYPOPQ86VE0 399 aaPredicted RBP15.25■□□□□ 0.03
UPF3A-206ENST00000480362 OR10AC1Q8NH08 325 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 CA5BP1Q8WTZ4 195 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 BCL7BQ9BQE9 202 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 OR10A4Q9H209 315 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 SLC24A3Q9HC58 644 aa15.25■□□□□ 0.03
UPF3A-206ENST00000480362 SC5DO75845 299 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 UBCP0CG48 685 aaKnown RBP15.24■□□□□ 0.03
UPF3A-206ENST00000480362 ACHEP22303 614 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 PAX7P23759 505 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 FGF9P31371 208 aaPredicted RBP15.24■□□□□ 0.03
UPF3A-206ENST00000480362 TGFBR1P36897 503 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 MAGEB1P43366 347 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 TBC1D28Q2M2D7 210 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 SNAI3Q3KNW1 292 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 FBXL19-AS1Q494R0 122 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 C1QTNF12Q5T7M4 302 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 C22orf42Q6IC83 251 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 ALKBH2Q6NS38 261 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 UNQ9370/PRO34162Q6UXP9 181 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 C22orf34Q6ZV56 151 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 FAM169BQ8N8A8 192 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 OR52H1Q8NGJ2 320 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 OR51A4Q8NGJ6 313 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 OR1J2Q8NGS2 313 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 OR51E1Q8TCB6 317 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 GPR148Q8TDV2 347 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 C1QTNF5Q9BXJ0 243 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 OR10A2Q9H208 303 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 KCNJ16Q9NPI9 418 aa15.24■□□□□ 0.03
UPF3A-206ENST00000480362 CRNNQ9UBG3 495 aaPredicted RBP15.24■□□□□ 0.03
UPF3A-206ENST00000480362 ESPL1Q14674 2120 aa15.23■□□□□ 0.03
UPF3A-206ENST00000480362 TRBV5-5A0A0J9YX44 114 aa15.23■□□□□ 0.03
UPF3A-206ENST00000480362 A0A1B0GTI1 187 aa15.23■□□□□ 0.03
UPF3A-206ENST00000480362 LOC107986453A0A1B0GWG9 222 aa15.23■□□□□ 0.03
UPF3A-206ENST00000480362 GATBO75879 557 aaKnown RBP15.23■□□□□ 0.03
UPF3A-206ENST00000480362 ATE1O95260 518 aa15.23■□□□□ 0.03
UPF3A-206ENST00000480362 IGLV1-44P01699 117 aa15.23■□□□□ 0.03
UPF3A-206ENST00000480362 ZNF83P51522 516 aa15.23■□□□□ 0.03
UPF3A-206ENST00000480362 GFOD2Q3B7J2 385 aa15.23■□□□□ 0.03
UPF3A-206ENST00000480362 ZMAT1Q5H9K5 638 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms