RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 OR2B8PP59922 312 aa8.75□□□□□ -1.01
CMC1-209ENST00000477739 ATPAF1Q5TC12 328 aaPredicted RBP8.75□□□□□ -1.01
CMC1-209ENST00000477739 GLIPR1L1Q6UWM5 242 aa8.75□□□□□ -1.01
CMC1-209ENST00000477739 CDH26Q8IXH8 852 aa8.75□□□□□ -1.01
CMC1-209ENST00000477739 OR51T1Q8NGJ9 327 aa8.75□□□□□ -1.01
CMC1-209ENST00000477739 OR51F2Q8NH61 342 aa8.75□□□□□ -1.01
CMC1-209ENST00000477739 FOXRED1Q96CU9 486 aaPredicted RBP8.75□□□□□ -1.01
CMC1-209ENST00000477739 ZDHHC12Q96GR4 267 aa8.75□□□□□ -1.01
CMC1-209ENST00000477739 EIF5A2Q9GZV4 153 aaKnown RBP8.75□□□□□ -1.01
CMC1-209ENST00000477739 ZNF576Q9H609 170 aa8.75□□□□□ -1.01
CMC1-209ENST00000477739 NAP1L6A6NFF2 107 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 MED6O75586 246 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 RCC1P18754 421 aaPredicted RBP8.74□□□□□ -1.01
CMC1-209ENST00000477739 PHLDA2Q53GA4 152 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 C1orf140Q5VVS0 124 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 BIVMQ86UB2 503 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 HSD17B11Q8NBQ5 300 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 FAM131CQ96AQ9 280 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 PHB2Q99623 299 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 LMF2Q9BU23 707 aaKnown RBP8.74□□□□□ -1.01
CMC1-209ENST00000477739 NKX6-2Q9C056 277 aaPredicted RBP8.74□□□□□ -1.01
CMC1-209ENST00000477739 RPS10P5Q9NQ39 176 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 EHFQ9NZC4 300 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 URGCP-MRPS24S4R325 110 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 ABCA1O95477 2261 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 OR6C76A6NM76 312 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 G3V3Q6 166 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 NME2P1O60361 137 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 ZNF254O75437 659 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 TGM6O95932 706 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 PTBP1P26599 531 aaKnown RBP eCLIP8.74□□□□□ -1.01
CMC1-209ENST00000477739 HSD17B7P56937 341 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 LPAL2Q16609 132 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 FAM122CQ6P4D5 195 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 NAA40Q86UY6 237 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 VASH2Q86V25 355 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 UBALD1Q8TB05 177 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 SEH1LQ96EE3 360 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 GPN3Q9UHW5 284 aaPredicted RBP8.74□□□□□ -1.01
CMC1-209ENST00000477739 KLK13Q9UKR3 277 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 SLC5A6Q9Y289 635 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 BDP1A6H8Y1 2624 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 TEX51A0A1B0GUA7 166 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 PRSS37A4D1T9 235 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 SULT1C2O00338 296 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 SOCS1O15524 211 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 GAAP10253 952 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 EDN3P14138 238 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 PGCP20142 388 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 KLK2P20151 261 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 FBLP22087 321 aaKnown RBP8.74□□□□□ -1.01
CMC1-209ENST00000477739 MST1P26927 711 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 KCNJ3P48549 501 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 CCR5P51681 352 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 INSM1Q01101 510 aaPredicted RBP8.74□□□□□ -1.01
CMC1-209ENST00000477739 RASGEF1BQ0VAM2 473 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 SNTB1Q13884 538 aaKnown RBP8.74□□□□□ -1.01
CMC1-209ENST00000477739 TMEM176BQ3YBM2 270 aaPredicted RBP8.74□□□□□ -1.01
CMC1-209ENST00000477739 PLXDC2Q6UX71 529 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 SLC51BQ86UW2 128 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 TMEM104Q8NE00 496 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 OR1S1Q8NH92 325 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 OTOSQ8NHW6 89 aa8.74□□□□□ -1.01
CMC1-209ENST00000477739 LCORQ96JN0 433 aaPredicted RBP8.74□□□□□ -1.01
CMC1-209ENST00000477739 SHOXO15266 292 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 ZNF749O43361 778 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 GLRA1P23415 457 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 ZNF93P35789 620 aaPredicted RBP8.73□□□□□ -1.01
CMC1-209ENST00000477739 LTBRP36941 435 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 GPR3P46089 330 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 PHF19Q5T6S3 580 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 PTCRAQ6ISU1 281 aaPredicted RBP8.73□□□□□ -1.01
CMC1-209ENST00000477739 ZNF440Q8IYI8 595 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 ZNF679Q8IYX0 411 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 SPAG16Q8N0X2 631 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 BVESQ8NE79 360 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 HDHD3Q9BSH5 251 aaPredicted RBP8.73□□□□□ -1.01
CMC1-209ENST00000477739 RSRP1Q9BUV0 290 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 VSIG4Q9Y279 399 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 TMEM225BP0DP42 221 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 PNLIPP16233 465 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 BCKDHBP21953 392 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 CSF2RBP32927 897 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 OR3A4PP47883 348 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 HNRNPKP61978 463 aaKnown RBP eCLIP8.73□□□□□ -1.013e-7■■■■□ 24.7
CMC1-209ENST00000477739 NHLRC3Q5JS37 347 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 SPIN3Q5JUX0 258 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 SLC16A13Q7RTY0 426 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 ADGRG3Q86Y34 549 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 PRR18Q8N4B5 295 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 C17orf78Q8N4C9 275 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 STOML3Q8TAV4 291 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 ZNF700Q9H0M5 742 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 PCDH15Q96QU1 1955 aa8.73□□□□□ -1.01
CMC1-209ENST00000477739 ZNF726A6NNF4 738 aa8.72□□□□□ -1.01
CMC1-209ENST00000477739 ZNF217O75362 1048 aa8.72□□□□□ -1.01
CMC1-209ENST00000477739 C1QL1O75973 258 aa8.72□□□□□ -1.01
CMC1-209ENST00000477739 RPL27P61353 136 aaKnown RBP8.72□□□□□ -1.01
CMC1-209ENST00000477739 MFAP5Q13361 173 aa8.72□□□□□ -1.01
CMC1-209ENST00000477739 ZNF141Q15928 474 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms