RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 GPRIN2O60269 458 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 SELENOFO60613 162 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 UBL3O95164 117 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 PTHP01270 115 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 HLA-HP01893 362 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 CRYAAP02489 173 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 SOD3P08294 240 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 MRPL3P09001 348 aaKnown RBP8.48□□□□□ -1.05
NIFK-205ENST00000477693 SPARCP09486 303 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 COX5BP10606 129 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 CD79AP11912 226 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 NAA10P41227 235 aaPredicted RBP8.48□□□□□ -1.05
NIFK-205ENST00000477693 GRB2P62993 217 aaKnown RBP8.48□□□□□ -1.05
NIFK-205ENST00000477693 HIST1H3AP68431 136 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 NAAAQ02083 359 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 ZNF85Q03923 595 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 MED22Q15528 200 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 NEDD8Q15843 81 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 SGCAQ16586 387 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 GSG1Q2KHT4 349 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 ZNF684Q5T5D7 378 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 HIST2H3PS2Q5TEC6 136 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 FDX2Q6P4F2 183 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 RPL22L1Q6P5R6 122 aaKnown RBP8.48□□□□□ -1.05
NIFK-205ENST00000477693 B3GLCTQ6Y288 498 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 HIST2H3AQ71DI3 136 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 VASH1Q7L8A9 365 aaPredicted RBP8.48□□□□□ -1.05
NIFK-205ENST00000477693 MYPOPQ86VE0 399 aaPredicted RBP8.48□□□□□ -1.05
NIFK-205ENST00000477693 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.48□□□□□ -1.05
NIFK-205ENST00000477693 ALDH16A1Q8IZ83 802 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 MS4A15Q8N5U1 240 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 IL17RDQ8NFM7 739 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 OR13F1Q8NGS4 319 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 ZNF420Q8TAQ5 688 aaPredicted RBP8.48□□□□□ -1.05
NIFK-205ENST00000477693 THEM6Q8WUY1 208 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 TMEM171Q8WVE6 324 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 RNF133Q8WVZ7 376 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 OR8B4Q96RC9 309 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 DHRS9Q9BPW9 319 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 RHNO1Q9BSD3 238 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 ABHD6Q9BV23 337 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 GSX2Q9BZM3 304 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 HDHD2Q9H0R4 259 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 CXorf56Q9H5V9 222 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 NOX3Q9HBY0 568 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 LAMP3Q9UQV4 416 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 LSM2Q9Y333 95 aaKnown RBP8.48□□□□□ -1.05
NIFK-205ENST00000477693 ABCA2Q9BZC7 2435 aa8.48□□□□□ -1.05
NIFK-205ENST00000477693 TVP23AA6NH52 213 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 ZNF878C9JN71 531 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 OGG1O15527 345 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 PLPP2O43688 288 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 SMPD2O60906 423 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 CELA3BP08861 270 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 CPEP16870 476 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 ZNF14P17017 642 aaPredicted RBP8.47□□□□□ -1.05
NIFK-205ENST00000477693 PSMB9P28065 219 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 CALCRP30988 508 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 RGS6P49758 472 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 IDH3GP51553 393 aaPredicted RBP8.47□□□□□ -1.05
NIFK-205ENST00000477693 CCR9P51686 369 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 RIDAP52758 137 aaKnown RBP8.47□□□□□ -1.05
NIFK-205ENST00000477693 TMBIM6P55061 237 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 RAB1AP62820 205 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 PIGFQ07326 219 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 EIF2B1Q14232 305 aaKnown RBP8.47□□□□□ -1.05
NIFK-205ENST00000477693 ARMCX4Q5H9R4 360 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 SLC16A14Q7RTX9 510 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 DCXRQ7Z4W1 244 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 KRT77Q7Z794 578 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 KRTAP1-3Q8IUG1 177 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 SKA3Q8IX90 412 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 NUP37Q8NFH4 326 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 ST7LQ8TDW4 575 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 PHYHIPQ92561 330 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 SGCDQ92629 289 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 UFD1Q92890 307 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 NABP1Q96AH0 204 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 DGCR14Q96DF8 476 aaKnown RBP8.47□□□□□ -1.05
NIFK-205ENST00000477693 KCNS3Q9BQ31 491 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 TRAF4Q9BUZ4 470 aaPredicted RBP8.47□□□□□ -1.05
NIFK-205ENST00000477693 DDX28Q9NUL7 540 aaKnown RBP8.47□□□□□ -1.05
NIFK-205ENST00000477693 ZNF701Q9NV72 531 aaPredicted RBP8.47□□□□□ -1.05
NIFK-205ENST00000477693 CLEC2DQ9UHP7 191 aa8.47□□□□□ -1.05
NIFK-205ENST00000477693 GDF2Q9UK05 429 aaPredicted RBP8.47□□□□□ -1.05
NIFK-205ENST00000477693 IGHV2OR16-5A0A0B4J2B6 119 aa8.46□□□□□ -1.06
NIFK-205ENST00000477693 A6NHS1 94 aa8.46□□□□□ -1.06
NIFK-205ENST00000477693 J3QLW9 94 aa8.46□□□□□ -1.06
NIFK-205ENST00000477693 NOL3O60936 208 aaKnown RBP8.46□□□□□ -1.06
NIFK-205ENST00000477693 INMTO95050 263 aa8.46□□□□□ -1.06
NIFK-205ENST00000477693 APOL3O95236 402 aa8.46□□□□□ -1.06
NIFK-205ENST00000477693 MPZL1O95297 269 aa8.46□□□□□ -1.06
NIFK-205ENST00000477693 SERPINA3P01011 423 aa8.46□□□□□ -1.06
NIFK-205ENST00000477693 CD8AP01732 235 aa8.46□□□□□ -1.06
NIFK-205ENST00000477693 HLA-DPB1P04440 258 aa8.46□□□□□ -1.06
NIFK-205ENST00000477693 H2BFMP0C1H6 154 aa8.46□□□□□ -1.06
NIFK-205ENST00000477693 ZNF19P17023 458 aa8.46□□□□□ -1.06
NIFK-205ENST00000477693 CDAP32320 146 aa8.46□□□□□ -1.06
NIFK-205ENST00000477693 OPRL1P41146 370 aa8.46□□□□□ -1.06
NIFK-205ENST00000477693 MAP2K4P45985 399 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms