RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 MALSU1Q96EH3 234 aa12.04□□□□□ -0.48
DFFB-209ENST00000477548 MEGF10Q96KG7 1140 aa12.04□□□□□ -0.48
DFFB-209ENST00000477548 PPP4R1LQ9P1A2 415 aa12.04□□□□□ -0.48
DFFB-209ENST00000477548 EML5Q05BV3 1969 aa12.04□□□□□ -0.48
DFFB-209ENST00000477548 URADA6NGE7 173 aa12.04□□□□□ -0.48
DFFB-209ENST00000477548 HOXB5P09067 269 aa12.04□□□□□ -0.48
DFFB-209ENST00000477548 PET100P0DJ07 73 aa12.04□□□□□ -0.48
DFFB-209ENST00000477548 HOXA5P20719 270 aa12.04□□□□□ -0.48
DFFB-209ENST00000477548 MPZP25189 248 aa12.04□□□□□ -0.48
DFFB-209ENST00000477548 NDUFA6P56556 154 aa12.04□□□□□ -0.48
DFFB-209ENST00000477548 RPS15AP62244 130 aaKnown RBP12.04□□□□□ -0.48
DFFB-209ENST00000477548 PRICKLE4Q2TBC4 344 aa12.04□□□□□ -0.48
DFFB-209ENST00000477548 C1orf53Q5VUE5 145 aa12.04□□□□□ -0.48
DFFB-209ENST00000477548 MDGA2Q7Z553 956 aa12.04□□□□□ -0.48
DFFB-209ENST00000477548 CACUL1Q86Y37 369 aa12.04□□□□□ -0.48
DFFB-209ENST00000477548 CSNK1A1LQ8N752 337 aa12.04□□□□□ -0.48
DFFB-209ENST00000477548 ASB5Q8WWX0 329 aa12.04□□□□□ -0.48
DFFB-209ENST00000477548 ELF4Q99607 663 aaPredicted RBP12.04□□□□□ -0.48
DFFB-209ENST00000477548 PIGQQ9BRB3 760 aa12.04□□□□□ -0.48
DFFB-209ENST00000477548 GAR1Q9NY12 217 aaKnown RBP12.04□□□□□ -0.48
DFFB-209ENST00000477548 TAAR5O14804 337 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 NKX2-2O95096 273 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 PNPP00491 289 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 CSTAP01040 98 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 IGKV1D-16P01601 117 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 RPS10P46783 165 aaKnown RBP12.03□□□□□ -0.48
DFFB-209ENST00000477548 SLC17A1Q14916 467 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 ZNF260Q3ZCT1 412 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 TMEM128Q5BJH2 165 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 SFTPA1Q8IWL2 248 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 MAFIPQ8WZ33 124 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.03□□□□□ -0.48
DFFB-209ENST00000477548 AMDHD2Q9Y303 409 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 HSPB2A8KAH6 182 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 UMAD1C9J7I0 102 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 LDLRAD4O15165 306 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 NUDT21O43809 227 aaKnown RBP12.03□□□□□ -0.48
DFFB-209ENST00000477548 CDX1P47902 265 aaPredicted RBP12.03□□□□□ -0.48
DFFB-209ENST00000477548 ENPP2Q13822 863 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 ZNHIT3Q15649 155 aaPredicted RBP12.03□□□□□ -0.48
DFFB-209ENST00000477548 HSPB2Q16082 182 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 ACTBL2Q562R1 376 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 MESTQ5EB52 335 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 TCEAL5Q5H9L2 206 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 ARRDC1Q8N5I2 433 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 OR1J1Q8NGS3 322 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 OTOSQ8NHW6 89 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 FAM46BQ96A09 425 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 MARS2Q96GW9 593 aaKnown RBP12.03□□□□□ -0.48
DFFB-209ENST00000477548 OR8B4Q96RC9 309 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 MESP1Q9BRJ9 268 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 RAB18Q9NP72 206 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 GDF2Q9UK05 429 aaPredicted RBP12.03□□□□□ -0.48
DFFB-209ENST00000477548 COLEC10Q9Y6Z7 277 aa12.03□□□□□ -0.48
DFFB-209ENST00000477548 PPM1AP35813 382 aa12.02□□□□□ -0.48
DFFB-209ENST00000477548 RBP2P50120 134 aa12.02□□□□□ -0.48
DFFB-209ENST00000477548 ZNF616Q08AN1 781 aa12.02□□□□□ -0.48
DFFB-209ENST00000477548 SQSTM1Q13501 440 aa12.02□□□□□ -0.48
DFFB-209ENST00000477548 GUK1Q16774 197 aa12.02□□□□□ -0.48
DFFB-209ENST00000477548 GRASPQ7Z6J2 395 aaPredicted RBP12.02□□□□□ -0.48
DFFB-209ENST00000477548 KDF1Q8NAX2 398 aaPredicted RBP12.02□□□□□ -0.48
DFFB-209ENST00000477548 TMEM52Q8NDY8 209 aa12.02□□□□□ -0.48
DFFB-209ENST00000477548 BADQ92934 168 aa12.02□□□□□ -0.48
DFFB-209ENST00000477548 GLRX2Q9NS18 164 aa12.02□□□□□ -0.48
DFFB-209ENST00000477548 DNAJB11Q9UBS4 358 aa12.02□□□□□ -0.48
DFFB-209ENST00000477548 HIF3AQ9Y2N7 669 aa12.02□□□□□ -0.48
DFFB-209ENST00000477548 H7C1Q1 480 aa12.02□□□□□ -0.49
DFFB-209ENST00000477548 GPR75O95800 540 aa12.02□□□□□ -0.49
DFFB-209ENST00000477548 CST4P01036 141 aa12.02□□□□□ -0.49
DFFB-209ENST00000477548 LYL1P12980 280 aa12.02□□□□□ -0.49
DFFB-209ENST00000477548 ZNF16P17020 682 aaPredicted RBP12.02□□□□□ -0.49
DFFB-209ENST00000477548 P2RY2P41231 377 aa12.02□□□□□ -0.49
DFFB-209ENST00000477548 NPY4RP50391 375 aa12.02□□□□□ -0.49
DFFB-209ENST00000477548 ELAVL3Q14576 367 aaKnown RBP12.02□□□□□ -0.49
DFFB-209ENST00000477548 MIDNQ504T8 468 aa12.02□□□□□ -0.49
DFFB-209ENST00000477548 TTLL10Q6ZVT0 673 aa12.02□□□□□ -0.49
DFFB-209ENST00000477548 PRR18Q8N4B5 295 aa12.02□□□□□ -0.49
DFFB-209ENST00000477548 OR13C3Q8NGS6 347 aa12.02□□□□□ -0.49
DFFB-209ENST00000477548 RNASE11Q8TAA1 199 aaKnown RBP12.02□□□□□ -0.49
DFFB-209ENST00000477548 CHST5Q9GZS9 411 aa12.02□□□□□ -0.49
DFFB-209ENST00000477548 VSX1Q9NZR4 365 aaPredicted RBP12.02□□□□□ -0.49
DFFB-209ENST00000477548 SPACA6W5XKT8 324 aa12.02□□□□□ -0.49
DFFB-209ENST00000477548 MEGF11A6BM72 1044 aa12.01□□□□□ -0.49
DFFB-209ENST00000477548 CXorf65A6NEN9 183 aa12.01□□□□□ -0.49
DFFB-209ENST00000477548 NME2P1O60361 137 aa12.01□□□□□ -0.49
DFFB-209ENST00000477548 SPARCP09486 303 aa12.01□□□□□ -0.49
DFFB-209ENST00000477548 PI3P19957 117 aa12.01□□□□□ -0.49
DFFB-209ENST00000477548 ZNF10P21506 573 aaPredicted RBP12.01□□□□□ -0.49
DFFB-209ENST00000477548 PSG6Q00889 435 aa12.01□□□□□ -0.49
DFFB-209ENST00000477548 MFGE8Q08431 387 aaPredicted RBP12.01□□□□□ -0.49
DFFB-209ENST00000477548 RHEBQ15382 184 aa12.01□□□□□ -0.49
DFFB-209ENST00000477548 TCEA2Q15560 299 aa12.01□□□□□ -0.49
DFFB-209ENST00000477548 NNATQ16517 81 aa12.01□□□□□ -0.49
DFFB-209ENST00000477548 ZNF74Q16587 644 aa12.01□□□□□ -0.49
DFFB-209ENST00000477548 FDX2Q6P4F2 183 aa12.01□□□□□ -0.49
DFFB-209ENST00000477548 CLEC18BQ6UXF7 455 aa12.01□□□□□ -0.49
DFFB-209ENST00000477548 TAF8Q7Z7C8 310 aa12.01□□□□□ -0.49
DFFB-209ENST00000477548 HOGA1Q86XE5 327 aa12.01□□□□□ -0.49
DFFB-209ENST00000477548 C12orf76Q8N812 135 aaPredicted RBP12.01□□□□□ -0.49
DFFB-209ENST00000477548 OR9K2Q8NGE7 335 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms