RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 PCOLCEQ15113 449 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 KCNMB1Q16558 191 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 DCAF12Q5T6F0 453 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 TMEM81Q6P7N7 255 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 RAB11FIP2Q7L804 512 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 MUC20Q8N307 709 aaPredicted RBP14.59□□□□□ -0.07
TMEM53-208ENST00000476724 OR10S1Q8NGN2 331 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 TNFAIP8L1Q8WVP5 186 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 FAM46BQ96A09 425 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 NUDT16L1Q9BRJ7 211 aaKnown RBP14.59□□□□□ -0.07
TMEM53-208ENST00000476724 CNTD2Q9H8S5 307 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 PARD6AQ9NPB6 346 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 FBLN5Q9UBX5 448 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 OPN4Q9UHM6 478 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 FBXL2Q9UKC9 423 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 A0A087WZY1 265 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 MCRIP1C9JLW8 97 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 F5H5P2 479 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 TLX3O43711 291 aaPredicted RBP14.59□□□□□ -0.07
TMEM53-208ENST00000476724 LMX1BO60663 402 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 STK17BO94768 372 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 CELA2AP08217 269 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 NR2C1P13056 603 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 RAB3AP20336 220 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 GNALP38405 381 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 EIF1AXP47813 144 aaKnown RBP14.59□□□□□ -0.07
TMEM53-208ENST00000476724 GMFBP60983 142 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 SLC35A1P78382 337 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 MEF2DQ14814 521 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 C4orf46Q504U0 113 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 ZNF529Q6P280 563 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 WDSUB1Q8N9V3 476 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 AQP3Q92482 292 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 ELMOD3Q96FG2 381 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 SEC61A2Q9H9S3 476 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 SLC5A6Q9Y289 635 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 POLR1DQ9Y2S0 133 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 LHFPL6Q9Y693 200 aa14.59□□□□□ -0.07
TMEM53-208ENST00000476724 TMEM82A0PJX8 343 aa14.58□□□□□ -0.08
TMEM53-208ENST00000476724 OR6C65A6NJZ3 312 aa14.58□□□□□ -0.08
TMEM53-208ENST00000476724 ZNF726A6NNF4 738 aa14.58□□□□□ -0.08
TMEM53-208ENST00000476724 C9J4A7 227 aa14.58□□□□□ -0.08
TMEM53-208ENST00000476724 H3BUI4 141 aa14.58□□□□□ -0.08
TMEM53-208ENST00000476724 IDO2Q6ZQW0 420 aa14.58□□□□□ -0.08
TMEM53-208ENST00000476724 GPAT4Q86UL3 456 aa14.58□□□□□ -0.08
TMEM53-208ENST00000476724 ZNF584Q8IVC4 421 aa14.58□□□□□ -0.08
TMEM53-208ENST00000476724 OR1J2Q8NGS2 313 aa14.58□□□□□ -0.08
TMEM53-208ENST00000476724 NKX3-1Q99801 234 aaPredicted RBP14.58□□□□□ -0.08
TMEM53-208ENST00000476724 GSX2Q9BZM3 304 aa14.58□□□□□ -0.08
TMEM53-208ENST00000476724 B3GNT4Q9C0J1 378 aa14.58□□□□□ -0.08
TMEM53-208ENST00000476724 CHCHD2Q9Y6H1 151 aaPredicted RBP14.58□□□□□ -0.08
TMEM53-208ENST00000476724 SDK2Q58EX2 2172 aa14.58□□□□□ -0.08
TMEM53-208ENST00000476724 LOC101059948A0A1B0GTJ6 334 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 A0A1W2PNR3 127 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 AQP7P3A6NL99 342 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 DISC1C4P0D8 188 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 RAB27BO00194 218 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 AMY2AP04746 511 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 CXCL2P19875 107 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 SEC61A1P61619 476 aaKnown RBP14.57□□□□□ -0.08
TMEM53-208ENST00000476724 GABREP78334 506 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 ZMYND11Q15326 602 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 TAF13Q15543 124 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 HIST3H3Q16695 136 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 ZNF260Q3ZCT1 412 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 C1QTNF12Q5T7M4 302 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 CDCP2Q5VXM1 449 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 OPN5Q6U736 354 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 CFAP77Q6ZQR2 320 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 TIPARPQ7Z3E1 657 aaKnown RBP14.57□□□□□ -0.08
TMEM53-208ENST00000476724 OR5M1Q8NGP8 315 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 ADAT3Q96EY9 351 aaPredicted RBP14.57□□□□□ -0.08
TMEM53-208ENST00000476724 STRADBQ9C0K7 418 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 RPS10-NUDT3A0A1W2PQS6 291 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 ZNF735P0CB33 412 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 H2BFSP57053 126 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 RPS18P62269 152 aaKnown RBP14.57□□□□□ -0.08
TMEM53-208ENST00000476724 INPP5JQ15735 1006 aaPredicted RBP14.57□□□□□ -0.08
TMEM53-208ENST00000476724 EXT1Q16394 746 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 MOGAT2Q3SYC2 334 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 TMEM176BQ3YBM2 270 aaPredicted RBP14.57□□□□□ -0.08
TMEM53-208ENST00000476724 CLVS2Q5SYC1 327 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 OR10K2Q6IF99 312 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 DHRS13Q6UX07 377 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 C3P1Q6ZMU1 363 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 PGAP1Q75T13 922 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 BPIFB2Q8N4F0 458 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 PAQR4Q8N4S7 273 aaPredicted RBP14.57□□□□□ -0.08
TMEM53-208ENST00000476724 OR52N4Q8NGI2 321 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 SFXN2Q96NB2 322 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 PRRT1Q99946 306 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 POFUT1Q9H488 388 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 TMEM185BQ9H7F4 350 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 SLC2A8Q9NY64 477 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 HS3ST3B1Q9Y662 390 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 OTOGLQ3ZCN5 2332 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 PCNX2A6NKB5 2137 aa14.57□□□□□ -0.08
TMEM53-208ENST00000476724 IGHV1-45A0A0A0MS14 117 aa14.56□□□□□ -0.08
TMEM53-208ENST00000476724 A0A1B0GTI1 187 aa14.56□□□□□ -0.08
TMEM53-208ENST00000476724 MASP2O00187 686 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms