RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 A0A1B0GVI7 797 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 SLC16A7O60669 478 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 OPN1MWP04001 364 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 OPN1MW2P0DN77 364 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 OPN1MW3P0DN78 364 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 ARF6P62330 175 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 GUCA2AQ02747 115 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 KRR1Q13601 381 aaKnown RBP10.41□□□□□ -0.74
SKA3-206ENST00000475251 TRAM2Q15035 370 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 KCNMB1Q16558 191 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 ZBED5Q49AG3 693 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 CDONQ4KMG0 1287 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 CLEC12AQ5QGZ9 265 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 BEND6Q5SZJ8 279 aaPredicted RBP10.41□□□□□ -0.74
SKA3-206ENST00000475251 GPR139Q6DWJ6 353 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 NANOGP8Q6NSW7 305 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 C11orf88Q6PI97 169 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 DNM1P34Q6PK57 102 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 RRM2BQ7LG56 351 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 ADCK1Q86TW2 530 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 OFCC1Q8IZS5 231 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 SPERTQ8NA61 448 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 C19orf18Q8NEA5 215 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 OR8J3Q8NGG0 315 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 OR13C2Q8NGS9 318 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 SPRYD4Q8WW59 207 aaPredicted RBP10.41□□□□□ -0.74
SKA3-206ENST00000475251 ACOT11Q8WXI4 607 aaPredicted RBP10.41□□□□□ -0.74
SKA3-206ENST00000475251 PPP1R14AQ96A00 147 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 TLCD1Q96CP7 247 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 TPD52L3Q96J77 140 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 Q96M85 177 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 SYT4Q9H2B2 425 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 NMNAT1Q9HAN9 279 aaPredicted RBP10.41□□□□□ -0.74
SKA3-206ENST00000475251 UFSP2Q9NUQ7 469 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 AURKCQ9UQB9 309 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 COA3Q9Y2R0 106 aaPredicted RBP10.41□□□□□ -0.74
SKA3-206ENST00000475251 ADAM18Q9Y3Q7 739 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 KPTNQ9Y664 436 aa10.41□□□□□ -0.74
SKA3-206ENST00000475251 TET2Q6N021 2002 aaPredicted RBP10.41□□□□□ -0.74
SKA3-206ENST00000475251 ZNF816-ZNF321PA0A0X1KG74 233 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 ANKRD61A6NGH8 418 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 OOEPA6NGQ2 149 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 G3V4G9 280 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 FUT4P22083 530 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 EEF1B2P24534 225 aaKnown RBP10.4□□□□□ -0.74
SKA3-206ENST00000475251 CRABP1P29762 137 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 SDHAP31040 664 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 SELENOWP63302 87 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 EGR3Q06889 387 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 MZT1Q08AG7 82 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 COX10Q12887 443 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 ECH1Q13011 328 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 FHL1Q13642 323 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 GK2Q14410 553 aaPredicted RBP10.4□□□□□ -0.74
SKA3-206ENST00000475251 HERPUD1Q15011 391 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 OR8G1Q15617 311 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 FAM189A2Q15884 450 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 LRRC23Q53EV4 343 aaPredicted RBP10.4□□□□□ -0.74
SKA3-206ENST00000475251 CYBRD1Q53TN4 286 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 SAMD5Q5TGI4 173 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 PRAMEF6Q5VXH4 476 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 SFRP4Q6FHJ7 346 aaPredicted RBP10.4□□□□□ -0.74
SKA3-206ENST00000475251 ZNF730Q6ZMV8 503 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 COLCA1Q6ZS62 124 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 PGAP1Q75T13 922 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 BTN2A1Q7KYR7 527 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 FAM122BQ7Z309 247 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 CALHM3Q86XJ0 350 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 CMTM4Q8IZR5 234 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 OR5R1Q8NH85 324 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 DMRTB1Q96MA1 342 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 CNTD2Q9H8S5 307 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 WDR76Q9H967 626 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 TMBIM4Q9HC24 238 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.4□□□□□ -0.74
SKA3-206ENST00000475251 VSX1Q9NZR4 365 aaPredicted RBP10.4□□□□□ -0.74
SKA3-206ENST00000475251 ZNRD1Q9P1U0 126 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 FBLN5Q9UBX5 448 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 TMEM5Q9Y2B1 443 aa10.4□□□□□ -0.74
SKA3-206ENST00000475251 GMDSO60547 372 aa10.39□□□□□ -0.75
SKA3-206ENST00000475251 NPPAP01160 153 aa10.39□□□□□ -0.75
SKA3-206ENST00000475251 IFNW1P05000 195 aa10.39□□□□□ -0.75
SKA3-206ENST00000475251 KDELR2P33947 212 aa10.39□□□□□ -0.75
SKA3-206ENST00000475251 HIST1H3AP68431 136 aa10.39□□□□□ -0.75
SKA3-206ENST00000475251 MPPED2Q15777 294 aa10.39□□□□□ -0.75
SKA3-206ENST00000475251 HIST2H3PS2Q5TEC6 136 aa10.39□□□□□ -0.75
SKA3-206ENST00000475251 METAP1DQ6UB28 335 aaPredicted RBP10.39□□□□□ -0.75
SKA3-206ENST00000475251 Q6ZPA2 131 aa10.39□□□□□ -0.75
SKA3-206ENST00000475251 TMPRSS11FQ6ZWK6 438 aa10.39□□□□□ -0.75
SKA3-206ENST00000475251 MBOAT2Q6ZWT7 520 aa10.39□□□□□ -0.75
SKA3-206ENST00000475251 HIST2H3AQ71DI3 136 aa10.39□□□□□ -0.75
SKA3-206ENST00000475251 MRPL21Q7Z2W9 205 aaKnown RBP10.39□□□□□ -0.75
SKA3-206ENST00000475251 VMO1Q7Z5L0 202 aa10.39□□□□□ -0.75
SKA3-206ENST00000475251 BOLLQ8N9W6 283 aaKnown RBP10.39□□□□□ -0.75
SKA3-206ENST00000475251 DYDC1Q8WWB3 177 aa10.39□□□□□ -0.75
SKA3-206ENST00000475251 ADAT1Q9BUB4 502 aaKnown RBP10.39□□□□□ -0.75
SKA3-206ENST00000475251 SMURF1Q9HCE7 757 aa10.39□□□□□ -0.75
SKA3-206ENST00000475251 MRGBPQ9NV56 204 aa10.39□□□□□ -0.75
SKA3-206ENST00000475251 RPS6KA6Q9UK32 745 aa10.39□□□□□ -0.75
SKA3-206ENST00000475251 F5H5K5 113 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms