RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.09□□□□□ -0.31
ITGB1-211ENST00000475184 POLR1DQ9Y2S0 133 aa13.09□□□□□ -0.31
ITGB1-211ENST00000475184 CAB39Q9Y376 341 aaPredicted RBP13.09□□□□□ -0.31
ITGB1-211ENST00000475184 V9GYY5 206 aaPredicted RBP13.09□□□□□ -0.31
ITGB1-211ENST00000475184 A0A1B0GVI7 797 aa13.08□□□□□ -0.32
ITGB1-211ENST00000475184 EFCAB9A8MZ26 197 aa13.08□□□□□ -0.32
ITGB1-211ENST00000475184 GPR37O15354 613 aa13.08□□□□□ -0.32
ITGB1-211ENST00000475184 NDUFA2O43678 99 aa13.08□□□□□ -0.32
ITGB1-211ENST00000475184 FCN3O75636 299 aa13.08□□□□□ -0.32
ITGB1-211ENST00000475184 ECDO95905 644 aaPredicted RBP13.08□□□□□ -0.32
ITGB1-211ENST00000475184 CD14P08571 375 aa13.08□□□□□ -0.32
ITGB1-211ENST00000475184 GABRA5P31644 462 aa13.08□□□□□ -0.32
ITGB1-211ENST00000475184 SLC9A3P48764 834 aa13.08□□□□□ -0.32
ITGB1-211ENST00000475184 DBPQ10586 325 aaPredicted RBP13.08□□□□□ -0.32
ITGB1-211ENST00000475184 GK2Q14410 553 aaPredicted RBP13.08□□□□□ -0.32
ITGB1-211ENST00000475184 C11orf91Q3C1V1 193 aa13.08□□□□□ -0.32
ITGB1-211ENST00000475184 CDONQ4KMG0 1287 aa13.08□□□□□ -0.32
ITGB1-211ENST00000475184 SLC35E4Q6ICL7 350 aa13.08□□□□□ -0.32
ITGB1-211ENST00000475184 COLCA1Q6ZS62 124 aa13.08□□□□□ -0.32
ITGB1-211ENST00000475184 FAM156AQ8NDB6 213 aa13.08□□□□□ -0.32
ITGB1-211ENST00000475184 PRRC1Q96M27 445 aa13.08□□□□□ -0.32
ITGB1-211ENST00000475184 ZNF583Q96ND8 569 aa13.08□□□□□ -0.32
ITGB1-211ENST00000475184 COQ7Q99807 217 aa13.08□□□□□ -0.32
ITGB1-211ENST00000475184 SYT4Q9H2B2 425 aa13.08□□□□□ -0.32
ITGB1-211ENST00000475184 FBLN5Q9UBX5 448 aa13.08□□□□□ -0.32
ITGB1-211ENST00000475184 A4GNTQ9UNA3 340 aa13.08□□□□□ -0.32
ITGB1-211ENST00000475184 COA3Q9Y2R0 106 aaPredicted RBP13.08□□□□□ -0.32
ITGB1-211ENST00000475184 KPTNQ9Y664 436 aa13.08□□□□□ -0.32
ITGB1-211ENST00000475184 TRAV38-1A0A0B4J264 116 aa13.07□□□□□ -0.32
ITGB1-211ENST00000475184 ANKRD61A6NGH8 418 aa13.07□□□□□ -0.32
ITGB1-211ENST00000475184 OOEPA6NGQ2 149 aa13.07□□□□□ -0.32
ITGB1-211ENST00000475184 DVL1O14640 695 aa13.07□□□□□ -0.32
ITGB1-211ENST00000475184 SLC16A7O60669 478 aa13.07□□□□□ -0.32
ITGB1-211ENST00000475184 KHDRBS3O75525 346 aaKnown RBP13.07□□□□□ -0.32
ITGB1-211ENST00000475184 PRKCDQ05655 676 aa13.07□□□□□ -0.32
ITGB1-211ENST00000475184 FAM122BQ7Z309 247 aa13.07□□□□□ -0.32
ITGB1-211ENST00000475184 GJC3Q8NFK1 279 aa13.07□□□□□ -0.32
ITGB1-211ENST00000475184 NPRL2Q8WTW4 380 aa13.07□□□□□ -0.32
ITGB1-211ENST00000475184 CNTD2Q9H8S5 307 aa13.07□□□□□ -0.32
ITGB1-211ENST00000475184 RPUSD1Q9UJJ7 312 aaKnown RBP13.07□□□□□ -0.32
ITGB1-211ENST00000475184 LHFPL6Q9Y693 200 aa13.07□□□□□ -0.32
ITGB1-211ENST00000475184 IFNA14P01570 189 aa13.06□□□□□ -0.32
ITGB1-211ENST00000475184 GYPAP02724 150 aa13.06□□□□□ -0.32
ITGB1-211ENST00000475184 IFNA8P32881 189 aa13.06□□□□□ -0.32
ITGB1-211ENST00000475184 HIST1H3AP68431 136 aa13.06□□□□□ -0.32
ITGB1-211ENST00000475184 KRR1Q13601 381 aaKnown RBP13.06□□□□□ -0.32
ITGB1-211ENST00000475184 OR8G1Q15617 311 aa13.06□□□□□ -0.32
ITGB1-211ENST00000475184 KCNMB1Q16558 191 aa13.06□□□□□ -0.32
ITGB1-211ENST00000475184 RSPO1Q2MKA7 263 aaPredicted RBP13.06□□□□□ -0.32
ITGB1-211ENST00000475184 OXLD1Q5BKU9 147 aa13.06□□□□□ -0.32
ITGB1-211ENST00000475184 VAX1Q5SQQ9 334 aa13.06□□□□□ -0.32
ITGB1-211ENST00000475184 HIST2H3PS2Q5TEC6 136 aa13.06□□□□□ -0.32
ITGB1-211ENST00000475184 METAP1DQ6UB28 335 aaPredicted RBP13.06□□□□□ -0.32
ITGB1-211ENST00000475184 HIST2H3AQ71DI3 136 aa13.06□□□□□ -0.32
ITGB1-211ENST00000475184 C11orf44Q8N8P7 122 aa13.06□□□□□ -0.32
ITGB1-211ENST00000475184 OR5R1Q8NH85 324 aa13.06□□□□□ -0.32
ITGB1-211ENST00000475184 SPRYD4Q8WW59 207 aaPredicted RBP13.06□□□□□ -0.32
ITGB1-211ENST00000475184 ST8SIA4Q92187 359 aa13.06□□□□□ -0.32
ITGB1-211ENST00000475184 PARD6BQ9BYG5 372 aa13.06□□□□□ -0.32
ITGB1-211ENST00000475184 PPA2Q9H2U2 334 aa13.06□□□□□ -0.32
ITGB1-211ENST00000475184 NECAP2Q9NVZ3 263 aa13.06□□□□□ -0.32
ITGB1-211ENST00000475184 ONECUT1Q9UBC0 465 aa13.06□□□□□ -0.32
ITGB1-211ENST00000475184 NOP16Q9Y3C1 178 aaKnown RBP13.06□□□□□ -0.32
ITGB1-211ENST00000475184 RNASEK-C17orf49H0YIS7 233 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 CDC42EP2O14613 210 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 PTBP3O95758 552 aaKnown RBP13.05□□□□□ -0.32
ITGB1-211ENST00000475184 ZNF26P17031 533 aaPredicted RBP13.05□□□□□ -0.32
ITGB1-211ENST00000475184 CA6P23280 308 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 GPR4P46093 362 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 MALLQ13021 153 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 CYBRD1Q53TN4 286 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 RABL3Q5HYI8 236 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 NANOGP8Q6NSW7 305 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 CORO6Q6QEF8 472 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 PGAP1Q75T13 922 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.05□□□□□ -0.32
ITGB1-211ENST00000475184 CALHM3Q86XJ0 350 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 FAM90A1Q86YD7 464 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 OFCC1Q8IZS5 231 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 TSPEARQ8WU66 669 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 CFHR4Q92496 578 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 SGCDQ92629 289 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 ADAT1Q9BUB4 502 aaKnown RBP13.05□□□□□ -0.32
ITGB1-211ENST00000475184 NDEL1Q9GZM8 345 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 SLC22A4Q9H015 551 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 TOR3AQ9H497 397 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 NMNAT1Q9HAN9 279 aaPredicted RBP13.05□□□□□ -0.32
ITGB1-211ENST00000475184 SIRT7Q9NRC8 400 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 AURKAIP1Q9NWT8 199 aaPredicted RBP13.05□□□□□ -0.32
ITGB1-211ENST00000475184 RHCGQ9UBD6 479 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 RPS6KA6Q9UK32 745 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 FOXJ3Q9UPW0 622 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 SIGLEC9Q9Y336 463 aa13.05□□□□□ -0.32
ITGB1-211ENST00000475184 IMPA2O14732 288 aa13.04□□□□□ -0.32
ITGB1-211ENST00000475184 NPFFO15130 113 aa13.04□□□□□ -0.32
ITGB1-211ENST00000475184 PAHP00439 452 aa13.04□□□□□ -0.32
ITGB1-211ENST00000475184 ACSM4P0C7M7 580 aa13.04□□□□□ -0.32
ITGB1-211ENST00000475184 EEF1B2P24534 225 aaKnown RBP13.04□□□□□ -0.32
ITGB1-211ENST00000475184 SDHAP31040 664 aa13.04□□□□□ -0.32
ITGB1-211ENST00000475184 EFNB2P52799 333 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms