RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 BPNT1O95861 308 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 WDPCPO95876 746 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 TGM6O95932 706 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 APOC1P02654 83 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 MELTFP08582 738 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 PRF1P14222 555 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 RAB3AP20336 220 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 ANOS1P23352 680 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 PRSS3P35030 304 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 FAUP35544 74 aaKnown RBP8.64□□□□□ -1.03
USP39-214ENST00000474572 CD96P40200 585 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 GSK3AP49840 483 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 ZNF84P51523 738 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 PRKXP51817 358 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 NUBP1P53384 320 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 FAPQ12884 760 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 AIMP2Q13155 320 aaKnown RBP8.64□□□□□ -1.03
USP39-214ENST00000474572 STK11Q15831 433 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 ST3GAL2Q16842 350 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 RSPO1Q2MKA7 263 aaPredicted RBP8.64□□□□□ -1.03
USP39-214ENST00000474572 KRTAP27-1Q3LI81 207 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 LINC00303Q3SY05 128 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 CCDC157Q569K6 752 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 WIPI1Q5MNZ9 446 aaPredicted RBP8.64□□□□□ -1.03
USP39-214ENST00000474572 DCAF10Q5QP82 559 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 RIPPLY2Q5TAB7 128 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 SLC25A25Q6KCM7 469 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 DHRS13Q6UX07 377 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 PGAP1Q75T13 922 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 GPR137CQ8N3F9 429 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 PAQR4Q8N4S7 273 aaPredicted RBP8.64□□□□□ -1.03
USP39-214ENST00000474572 SUMF1Q8NBK3 374 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 CLEC1AQ8NC01 280 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 OR11H7Q8NGC8 314 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 OR52N4Q8NGI2 321 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 OR5D14Q8NGL3 314 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 OR51E1Q8TCB6 317 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 ZFAND1Q8TCF1 268 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 CPT1CQ8TCG5 803 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 GIMAP1Q8WWP7 306 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 CPNE4Q96A23 557 aaPredicted RBP8.64□□□□□ -1.03
USP39-214ENST00000474572 MED30Q96HR3 178 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 SFXN2Q96NB2 322 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 FAM210AQ96ND0 272 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 BEX2Q9BXY8 128 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 ULBP2Q9BZM5 246 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 ATG5Q9H1Y0 275 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 MED28Q9H204 178 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 SLCO5A1Q9H2Y9 848 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 TP63Q9H3D4 680 aaPredicted RBP8.64□□□□□ -1.03
USP39-214ENST00000474572 CNTD2Q9H8S5 307 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 STMN3Q9NZ72 180 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 PTTG3PQ9NZH4 202 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 MRPL15Q9P015 296 aaKnown RBP8.64□□□□□ -1.03
USP39-214ENST00000474572 RAB22AQ9UL26 194 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 V9GYS6 101 aa8.64□□□□□ -1.03
USP39-214ENST00000474572 ZDBF2Q9HCK1 2354 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 IGKV3D-15A0A087WSY6 115 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 MEIKINA0A087WXM9 373 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 DCDC2BA2VCK2 349 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 WIPF3A6NGB9 483 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 STMND1H3BQB6 276 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 RAB27BO00194 218 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 CXCL13O43927 109 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 SCGNO76038 276 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 LPLP06858 475 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 ERCC1P07992 297 aaPredicted RBP8.63□□□□□ -1.03
USP39-214ENST00000474572 CST2P09228 141 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 AKAIN1P0CW23 69 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 CRYGSP22914 178 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 GDF1P27539 372 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 HOXD11P31277 338 aaPredicted RBP8.63□□□□□ -1.03
USP39-214ENST00000474572 NTF4P34130 210 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 CASRP41180 1078 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 GUCA1AP43080 201 aaPredicted RBP8.63□□□□□ -1.03
USP39-214ENST00000474572 CARD18P57730 90 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 ACTBP60709 375 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 ACTG1P63261 375 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 MRPS15P82914 257 aaKnown RBP8.63□□□□□ -1.03
USP39-214ENST00000474572 OC90Q02509 493 aaPredicted RBP8.63□□□□□ -1.03
USP39-214ENST00000474572 GUCA2AQ02747 115 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 PMPCAQ10713 525 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 UNC119Q13432 240 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 TAF13Q15543 124 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 SGCAQ16586 387 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 HYAL4Q2M3T9 481 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 ZNF260Q3ZCT1 412 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 ABHD17BQ5VST6 288 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 METTL11BQ5VVY1 283 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 SFRP4Q6FHJ7 346 aaPredicted RBP8.63□□□□□ -1.03
USP39-214ENST00000474572 RAB12Q6IQ22 244 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 OR2W3Q7Z3T1 314 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 JAGN1Q8N5M9 183 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 ZNF283Q8N7M2 679 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 TMEM229BQ8NBD8 167 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 OR4C16Q8NGL9 310 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 OR10D3Q8NH80 312 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 CAPSLQ8WWF8 208 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 AQP3Q92482 292 aa8.63□□□□□ -1.03
USP39-214ENST00000474572 C10orf35Q96D05 121 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms